Epibacterium ulvae gen. nov., sp nov., epibiotic bacteria isolated from the surface of a marine alga

被引:15
|
作者
Penesyan, Anahit [1 ,2 ]
Breider, Sven [3 ]
Schumann, Peter [4 ]
Tindall, Brian J. [4 ]
Egan, Suhelen [1 ,2 ]
Brinkhoff, Thorsten [3 ]
机构
[1] Univ New S Wales, Sch Biotechnol & Biomol Sci, Sydney, NSW 2052, Australia
[2] Univ New S Wales, Ctr Marine Bioinnovat, Sydney, NSW 2052, Australia
[3] Carl von Ossietzky Univ Oldenburg, Inst Chem & Biol Marine Environm, D-26111 Oldenburg, Germany
[4] Leibniz Inst DSMZ Deutsch Sammlung Mikroorganisme, D-38124 Braunschweig, Germany
基金
澳大利亚研究理事会;
关键词
PERFORMANCE LIQUID-CHROMATOGRAPHY; AEROBIC ANOXYGENIC PHOTOTROPHS; ROSEOBACTER-CLADE; RENATURATION RATES; DNA HYBRIDIZATION; RAPID METHOD; COMB.-NOV; DIVERSITY; RECLASSIFICATION; PRIMERS;
D O I
10.1099/ijs.0.042838-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two Gram-reaction-negative, rod-shaped, motile bacteria, designated strains U82 and U95(T), were isolated from the marine alga Ulva australis collected at Sharks Point, Clovelly, a rocky intertidal zone near Sydney, Australia. Both strains were oxidase- and catalase-positive, formed brown- to black-pigmented colonies and required NaCl for growth. Phylogenetic analysis based on nearly complete 16S rRNA gene sequences revealed that these strains belong to the Roseobacter clade within the Alphaproteobacteria. The 16S rRNA genes of both strains were identical across the sequenced 1326 nt, but showed differences in the intergenic spacer region (ITS) between the 16S and the 23S rRNA genes. At the genomic level the DNA G+C contents of strains U82 and U95(T) were identical (52.6 mol%) and they had a DNA-DNA hybridization value of 83.7%, suggesting that these strains belong to the same species. The closest described phylogenetic neighbour to strains U82 and U95(T) was Thalassobius aestuarii DSM 15283(T) with 95.8% 16S rRNA gene sequence similarity. Other close relatives include further species of the genera Thalassobius and Shimia. Strains U82 and U95(T) were negative for bacteriochlorophyll a production, showed antibacterial activity towards other marine bacteria, were resistant to the antibiotics gentamicin and spectinomycin and were unable to hydrolyse starch or gelatin. The major fatty acids (>1 %) were 18 : 1 omega 7c, 16 : 0, 18 : 2, 10 : 0 3-OH, 12 : 0, 20 : 1 2-OH and 18 : 0. The polar lipid pattern indicated the presence of phosphatidylglycerol, phosphatidylcholine, two unidentified aminolipids and four unidentified phospholipids. Both strains produced ubiquinone 10 (Q-10) as the sole respiratory lipoquinone. Based on their phenotypic and phylogenetic characteristics, it is suggested that strains U82 and U95(T) are members of a novel species within a new genus for which the name Epibacterium ulvae gen. nov., sp. nov. is proposed. The type strain of the type species is U95(T) (=DSM 24752(T)=LMG 26464(T)).
引用
收藏
页码:1589 / 1596
页数:8
相关论文
共 50 条
  • [21] Aurantibacter crassamenti gen. nov., sp nov., a bacterium isolated from marine sediment
    Yoon, Jaewoo
    Kasai, Hiroaki
    ARCHIVES OF MICROBIOLOGY, 2017, 199 (01) : 85 - 91
  • [22] Pacificibacter maritimus gen. nov., sp nov., isolated from shallow marine sediment
    Romanenko, Lyudmila A.
    Tanaka, Naoto
    Svetashev, Vasily I.
    Kalinovskaya, Nataliya I.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 1375 - 1381
  • [23] Longimonas halophila gen. nov., sp nov., isolated from a marine solar saltern
    Xia, Jun
    Zhou, Yan-Xia
    Zhao, Li-Hua
    Chen, Guan-Jun
    Du, Zong-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 : 2272 - 2276
  • [24] Citreibacter salsisoli gen. nov., sp nov., a bacterium isolated from marine soil
    Yoon, Jaewoo
    Choi, Min Kyoung
    Nam, Sang-Jip
    ARCHIVES OF MICROBIOLOGY, 2018, 200 (03) : 445 - 451
  • [25] Parasphingopyxis lamellibrachiae gen. nov., sp nov., isolated from a marine annelid worm
    Uchida, Hiromi
    Hamana, Koei
    Miyazaki, Masayuki
    Yoshida, Takao
    Nogi, Yuichi
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 2224 - 2228
  • [26] Salinirussus salinus gen. nov., sp nov., isolated from a marine solar saltern
    Cui, Heng-Lin
    Lu, Zhen-Zhen
    Li, Yang
    Zhou, Yao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (09) : 3622 - 3626
  • [27] Oceanibium sediminis gen. nov., sp. nov., isolated from marine sediment
    Chang, Ya-Qi
    Meng, Xue
    Du, Zhao-Zhong
    Du, Zong-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (01) : 249 - 254
  • [28] Nautella italica gen. nov., sp nov., isolated from a marine electroactive biofilm
    Vandecandelaere, Ilse
    Nercessian, Olivier
    Segaert, Eveline
    Achouak, Wafa
    Mollica, Alfonso
    Faimali, Marco
    Vandamme, Peter
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 811 - 817
  • [29] Salinirubellus salinus gen. nov., sp nov., isolated from a marine solar saltern
    Hou, Jing
    Zhao, Yang-Jie
    Zhu, Lin
    Cui, Heng-Lin
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (06) : 1874 - 1878
  • [30] Paraoerskovia marina gen. nov., sp nov., an actinobacterium isolated from marine sediment
    Khan, Shams Tabrez
    Harayama, Shigeaki
    Tamura, Tomohiko
    Ando, Katsuhiko
    Takagi, Motoki
    Kazuo, Shin-ya
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 2094 - 2098