TryTransDB: A web-based resource for transport proteins in Trypanosomatidae

被引：0
|
作者：
Sonar, Krushna [1 ]
Kabra, Ritika [1 ]
Singh, Shailza [1 ]
机构：
[1] Natl Ctr Cell Sci, NCCS Complex,SP Pune Univ Campus, Pune 411007, Maharashtra, India
来源：
SCIENTIFIC REPORTS | 2018年 / 8卷
关键词：
TRYPANOSOMIASIS;
D O I：
10.1038/s41598-018-22706-x
中图分类号：
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
TryTransDB is a web-based resource that stores transport protein data which can be retrieved using a standalone BLAST tool. We have attempted to create an integrated database that can be a one-stop shop for the researchers working with transport proteins of Trypanosomatidae family. TryTransDB (Trypanosomatidae Transport Protein Database) is a web based comprehensive resource that can fire a BLAST search against most of the transport protein sequences (protein and nucleotide) from Trypanosomatidae family organisms. This web resource further allows to compute a phylogenetic tree by performing multiple sequence alignment (MSA) using CLUSTALW suite embedded in it. Also, cross-linking to other databases helps in gathering more information for a certain transport protein in a single website.
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页数：6
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