Genetics and genomics of moso bamboo (Phyllostachys edulis): Current status, future challenges, and biotechnological opportunities toward a sustainable bamboo industry

被引:98
作者
Ramakrishnan, Muthusamy [1 ]
Yrjala, Kim [1 ,2 ]
Vinod, Kunnummal Kurungara [3 ]
Sharma, Anket [1 ]
Cho, Jungnam [4 ,5 ]
Satheesh, Viswanathan [4 ,6 ]
Zhou, Mingbing [1 ,7 ]
机构
[1] Zhejiang A&F Univ, State Key Lab Subtrop Silviculture, Hangzhou 311300, Zhejiang, Peoples R China
[2] Univ Helsinki, Dept Forest Sci, Helsinki, Finland
[3] ICAR Indian Agr Res Inst, Div Genet, New Delhi, India
[4] Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, Natl Key Lab Plant Mol Genet, Shanghai Inst Plant Physiol & Ecol, Shanghai, Peoples R China
[5] Chinese Acad Sci, CAS JIC Ctr Excellence Plant & Microbial Sci CEPA, Shanghai, Peoples R China
[6] Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, Shanghai Ctr Plant Stress Biol, Shanghai, Peoples R China
[7] Zhejiang A&F Univ, Zhejiang Prov Collaborat Innovat Ctr Bamboo Resou, Hangzhou, Peoples R China
来源
FOOD AND ENERGY SECURITY | 2020年 / 9卷 / 04期
基金
中国国家自然科学基金;
关键词
bamboo industry; bioeconomy; biotechnology; genomics; moso bamboo; Phyllostachys edulis; sustainable development; transposons; CROSS-SPECIES AMPLIFICATION; TRANSPOSABLE ELEMENTS; BAMBUSA-EDULIS; SSR MARKERS; MICROSATELLITE MARKERS; POACEAE BAMBUSOIDEAE; WIDE IDENTIFICATION; PHYLOGENETIC-RELATIONSHIPS; TRANSCRIPTION FACTORS; FUNCTIONAL-ANALYSIS;
D O I
10.1002/fes3.229
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Sustainable goals for contemporary world seek viable solutions for interconnected challenges, particularly in the fields of food and energy security and climate change. We present bamboo, one of the versatile plant species on earth, as an ideal candidate for bioeconomy for meeting some of these challenges. With its potential realized, particularly in the industrial sector, countries such as China are going extensive with bamboo development and cultivation to support a myriad of industrial uses. These include timber, fiber, biofuel, paper, food, and medicinal industries. Bamboo is an ecologically viable choice, having better adaptation to wider environments than do other grasses, and can help to restore degraded lands and mitigate climate change. Bamboo, as a crop species, has not become amenable to genetic improvement, due to its long breeding cycle, perennial nature, and monocarpic behavior. One of the commonly used species, moso bamboo (Phyllostachys edulis) is a potential candidate that qualifies as industrial bamboo. With its whole-genome information released, genetic manipulations of moso bamboo offer tremendous potential to meet the industrial expectations either in quality or in quantity. Further, bamboo cultivation can expect several natural hindrances through biotic and abiotic stresses, which needs viable solutions such as genetic resistance. Taking a pragmatic view of these future requirements, we have compiled the present status of bamboo physiology, genetics, genomics, and biotechnology, particularly of moso bamboo, to drive various implications in meeting industrial and cultivation requirements. We also discuss challenges underway, caveats, and contextual opportunities concerning sustainable development.
引用
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页数:36
相关论文
共 281 条
  • [51] Fu M., 1999, BAMBOO CONSERVATION
  • [52] Hormone Distribution and Transcriptome Profiles in Bamboo Shoots Provide Insights on Bamboo Stem Emergence and Growth
    Gamuyao, Rico
    Nagai, Keisuke
    Ayano, Madoka
    Mori, Yoshinao
    Minami, Anzu
    Kojima, Mikiko
    Suzuki, Takamasa
    Sakakibara, Hitoshi
    Higashiyama, Tetsuya
    Ashikari, Motoyuki
    Reuscher, Stefan
    [J]. PLANT AND CELL PHYSIOLOGY, 2017, 58 (04) : 702 - 716
  • [53] Identification and characterization of microRNAs at different flowering developmental stages in moso bamboo (Phyllostachys edulis) by high-throughput sequencing
    Gao, Jian
    Ge, Wei
    Zhang, Ying
    Cheng, Zhanchao
    Li, Long
    Hou, Dan
    Hou, Chenglin
    [J]. MOLECULAR GENETICS AND GENOMICS, 2015, 290 (06) : 2335 - 2353
  • [54] Characterization of the Floral Transcriptome of Moso Bamboo (Phyllostachys edulis) at Different Flowering Developmental Stages by Transcriptome Sequencing and RNA-Seq Analysis
    Gao, Jian
    Zhang, Ying
    Zhang, Chunling
    Qi, Feiyan
    Li, Xueping
    Mu, Shaohua
    Peng, Zhenhua
    [J]. PLOS ONE, 2014, 9 (06):
  • [55] Genome-wide identification of PHD-finger genes and expression pattern analysis under various treatments in moso bamboo (Phyllostachys edulis)
    Gao, Yameng
    Liu, Huanlong
    Wang, Yujiao
    Li, Fei
    Xiang, Yan
    [J]. PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2018, 123 : 378 - 391
  • [56] DREAMSeq: An Improved Method for Analyzing Differentially Expressed Genes in RNA-seq Data
    Gao, Zhihua
    Zhao, Zhiying
    Tang, Wenqiang
    [J]. FRONTIERS IN GENETICS, 2018, 9
  • [57] Main regulatory pathways, key genes and microRNAs involved in flower formation and development of moso bamboo (Phyllostachys edulis)
    Ge, Wei
    Zhang, Ying
    Cheng, Zhanchao
    Hou, Dan
    Li, Xueping
    Gao, Jian
    [J]. PLANT BIOTECHNOLOGY JOURNAL, 2017, 15 (01) : 82 - 96
  • [58] Functional characterization of a serine-threonine protein kinase from Bambusa balcooa that implicates in cellulose overproduction and superior quality fiber formation
    Ghosh, Jayadri Sekhar
    Chaudhuri, Shubho
    Dey, Nrisingha
    Pal, Amita
    [J]. BMC PLANT BIOLOGY, 2013, 13
  • [59] Ghosh S, 2011, J PLANT MOL BIOL BIO, V2, P15
  • [60] Gielis J, 1998, 5 INT BAMB C SAN JOS