Development and validation of a hydrophilic interaction liquid chromatography-tandem mass spectrometry method for the quantification of lipid-related extracellular metabolites in Saccharomyces cerevisiae

被引:13
|
作者
Sun, Tao [2 ]
Wetzel, Stephanie J. [2 ]
Johnson, Mitchell E. [2 ]
Surlow, Beth A. [1 ]
Patton-Vogt, Jana [1 ]
机构
[1] Duquesne Univ, Dept Biol Sci, Pittsburgh, PA 15282 USA
[2] Duquesne Univ, Dept Chem & Biochem, Pittsburgh, PA 15282 USA
来源
JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES | 2012年 / 897卷
基金
美国国家科学基金会;
关键词
HILIC-MS/MS; Glycerophospholipid metabolites; Metabolomics; Saccharomyces cerevisiae; Metabolic footprinting; FUNCTIONAL GENOMICS; GENE DISRUPTION; BUDDING YEAST; IN-VIVO; METABOLOMICS; PHOSPHATIDYLCHOLINE; GLYCEROPHOSPHOINOSITOL; MUTANTS; SEPARATION; TURNOVER;
D O I
10.1016/j.jchromb.2012.03.034
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A highly sensitive hydrophilic interaction liquid chromatography-tandem mass spectrometry (HILIC-MS/MS) method was developed and validated for the quantification of glycerophosphoinositol (GroPIns), glycerophosphocholine (GroPCho), glycerol 3-phosphate (GroP), inositol, and choline in the extracellular medium of Saccharomyces cerevisiae. The media samples were pretreated with a single two-phase liquid extraction. Chromatographic separation was achieved on a Waters Xbridge HILIC (150 mm x 4.6 mm, 5 mu m) column under isocratic conditions using a mobile phase composed of acetonitrile/water, 70:30 (v/v) with 10 mM ammonium acetate (pH adjusted to 4.5) at a flow-rate of 0.5 mL/min. Using a triple quadrupole tandem mass spectrometer, samples were detected in multiple reaction monitoring (MRM) mode via an electrospray ionization (ESI) source. The calibration curves were linear (r(2) >= 0.995) over the range of 0.5-150 nM, with the lower limit of quantitation validated at 0.5 nM for all analytes. The intra- and inter-day precision (calculated by coefficient of variation, CV%) ranged from 1.24 to 5.88% and 2.46 to 9.77%, respectively, and intra- and inter-day accuracy (calculated by relative error, RE%) was between -8.42 to 8.22% and -9.35 to 6.62%, respectively, at all quality control levels. The extracellular metabolites were stable throughout various storage stability studies. The fully validated method was successfully applied to determine the extracellular levels of phospholipid-related metabolites in S. cerevisiae. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:1 / 9
页数:9
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