The number of cloves in a garlic bulb is controlled by axillary meristem differentiation, which directly determines the propagation efficiency. Our previous study showed that injecting garlic plants with gibberellins (GA(3)) solution significantly increased clove number per bulb. However, the physiological and molecular mechanism of GA-induced axillary bud formation is still unknown. Herein, dynamic changes in histology, phytohormones, sugars and related genes expression at 2, 4, 8, 16 and 32 days after treatment (DAT) were investigated. Histological results indicated two stages (axillary meristem initiation and dormancy) were in the period of 0-30 days after GA(3)treatment. Application of GA(3)caused a significant increase of GA(3)and GA(4), and the downregulation ofAsGA20oxexpression. Furthermore, the change trends in zeatin riboside (ZR) and soluble sugar were the same, in which a high level of ZR at 2 DAT and high content of soluble sugar, glucose and fructose at 4 DAT were recorded, and a low level of ZR and soluble sugar arose at 16 and 32 DAT. Overall, injection of GA(3)firstly caused the downregulation ofAsGA20ox, a significant increase in the level of ZR and abscisic acid (ABA), and the upregulation ofAsCYP735andAsAHKto activate axillary meristem initiation. Low level of ZR and soluble sugar and a high level of sucrose maintained axillary meristem dormancy.