The complete mitochondrial DNA genome of a Chloridea (Heliothis) subflexa (Lepidoptera: Noctuidae) morpho-species

被引：10

作者：

de Souza, Bruna Raquel ^{[1
,2
]}

Tay, Wee Tek ^{[1
]}

Czepak, Cecilia ^{[3
]}

Elfekih, Samia ^{[1
]}

Walsh, Thomas Kieran ^{[1
]}

机构：

[1] CSIRO, Black Mt Labs, Clunies Ross St, Canberra, ACT 2601, Australia

[2] Univ Fed Santa Catarina, Ctr Ciencias Biol, Florianopolis, SC, Brazil

[3] Univ Fed Goias, Escola Agron, Goiania, Go, Brazil

来源：

MITOCHONDRIAL DNA PART A | 2016年 / 27卷 / 06期

关键词：

Biosecurity; heliothine moths; species genetic diversity;

D O I：

10.3109/19401736.2015.1101549

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We investigate the complete mitogenome of a pheromone-trapped morpho-species of Chloridea subflexa from Brazil (initially identified by the Sanger sequencing of partial mtCOI gene) as 15 323 bp (KT598688) via next generation sequencing platform. The mitogenome has an A/T rich base composition (A: 40.4%; T: 40.3%; C: 11.5%; G: 7.8%), and included 13 proteincoding genes (PCGs), 22 tRNAs, 2 ribosomal RNAs and a putative replication region (ca. 323 bp). All PCGs start with a methionine (M) amino acid except the COI gene which has an arginine (R). The trnL2 and trn-Lys genes were partially embedded within the COII gene, while the trn-His gene was completely embedded within the ND4 gene. All PCGs ends with the "TAA'' stop codon except ND3 which has a "TAG'' stop codon.

引用

页码：4532 / 4533

页数：2

共 13 条

[1] Tandem repeats finder: a program to analyze DNA sequences [J].

Benson, G .

NUCLEIC ACIDS RESEARCH, 1999, 27 (02) :573-580

[2] MITOS: Improved de novo metazoan mitochondrial genome annotation [J].

Bernt, Matthias ;

Donath, Alexander ;

Juehling, Frank ;

Externbrink, Fabian ;

Florentz, Catherine ;

Fritzsch, Guido ;

Puetz, Joern ;

Middendorf, Martin ;

Stadler, Peter F. .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319

[3]

Czepak Cecília, 2013, Pesqui. Agropecu. Trop., V43, P110, DOI 10.1590/S1983-40632013000100015

[4] New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0 [J].

Guindon, Stephane ;

Dufayard, Jean-Francois ;

Lefort, Vincent ;

Anisimova, Maria ;

Hordijk, Wim ;

Gascuel, Olivier .

SYSTEMATIC BIOLOGY, 2010, 59 (03) :307-321

[5] Ten species in one:: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator [J].

Hebert, PDN ;

Penton, EH ;

Burns, JM ;

Janzen, DH ;

Hallwachs, W .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (41) :14812-14817

[6] The Potential Distribution of Invading Helicoverpa armigera in North America: Is It Just a Matter of Time? [J].

Kriticos, Darren J. ;

Ota, Noboru ;

Hutchison, William D. ;

Beddow, Jason ;

Walsh, Tom ;

Tay, Wee Tek ;

Borchert, Daniel M. ;

Paula-Moreas, Silvana V. ;

Czepak, Cecilia ;

Zalucki, Myron P. .

PLOS ONE, 2015, 10 (03)

[7] Species delimitation - a geneious plugin for the exploration of species boundaries [J].

Masters, Bradley C. ;

Fan, Vicky ;

Ross, Howard A. .

MOLECULAR ECOLOGY RESOURCES, 2011, 11 (01) :154-157

[8] Update on the environmental and economic costs associated with alien-invasive species in the United States [J].

Pimentel, D ;

Zuniga, R ;

Morrison, D .

ECOLOGICAL ECONOMICS, 2005, 52 (03) :273-288

[9]

Piper CM, 2015, MITOCHONDR DNA, DOI [10.3109/19401736.2015.1079893, DOI 10.3109/19401736.2015.1079893]

[10] Revised status of Chloridea Duncan and (Westwood), 1841, for the Heliothis virescens species group (Lepidoptera: Noctuidae: Heliothinae) based on morphology and three genes [J].

Pogue, Michael G. .

SYSTEMATIC ENTOMOLOGY, 2013, 38 (03) :523-542

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