Oceanicola litoreus sp nov., an alphaproteobacterium isolated from the seashore sediment

被引:14
作者
Park, Sooyeon [1 ]
Lee, Mi-Hwa [1 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
来源
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY | 2013年 / 103卷 / 04期
关键词
Oceanicola litoreus sp nov; Novel species; Polyphasic taxonomy; Seashore sediment; SOUTH CHINA SEA; BACTERIA; IDENTIFICATION;
D O I
10.1007/s10482-012-9867-z
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-negative, non-motile, facultatively aerobic and rod-shaped bacterial strain, designated M-M22(T), was isolated from seashore sediment on the southern coast in Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain M-M22(T) was observed to grow optimally at pH 7.0-7.5, at 30 A degrees C and in the presence of 2 % (w/v) NaCl. Neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain M-M22(T) fell within the clade comprising the type strains of Oceanicola species, except Oceanicola granulosus. Strain M-M22(T) exhibited the highest 16S rRNA gene sequence similarity values (each 95.4 %) to the type strains of Oceanicola batsensis and Oceanicola nitratireducens and 93.9-94.8 % sequence similarity to the type strains of the other Oceanicola species Strain M-M22(T) was found to contain Q-10 as the predominant ubiquinone and C-18:1 omega 7c as the predominant fatty acid. Major polar lipids were determined to be phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid and one unidentified lipid. The DNA G+C content was determined to be 67.6 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain M-M22(T) is distinguished from other Oceanicola species. On the basis of the data presented, strain M-M22(T) is considered to represent a novel species of the genus Oceanicola, for which the name Oceanicola litoreus sp. nov. is proposed. The type strain is M-M22(T) (= KCTC 32083(T) = CCUG 62794(T)).
引用
收藏
页码:859 / 866
页数:8
相关论文
共 22 条
[1]  
[Anonymous], 1990, Technical Note 101
[2]  
BAUMANN P, 1981, PROKARYOTES, V1, P1302
[3]   Muricauda ruestringensis gen. nov., sp nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment [J].
Bruns, A ;
Rohde, M ;
Berthe-Corti, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1997-2006
[4]   Oceanicola granulosus gen. nov., sp nov and Oceanicola batsensis sp nov., poly-β-hydroxybutyrate-producing marine bacteria in the order 'Rhodobacterales' [J].
Cho, JC ;
Giovannoni, SJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1129-1136
[5]   KINETIC STUDIES OF PIGMENT SYNTHESIS BY NON-SULFUR PURPLE BACTERIA [J].
COHENBAZIRE, G ;
SISTROM, WR ;
STANIER, RY .
JOURNAL OF CELLULAR AND COMPARATIVE PHYSIOLOGY, 1957, 49 (01) :25-68
[6]  
Cowan ST, 1965, MANUAL IDENTIFICATIO
[7]   Oceanicola nanhaiensis sp nov., isolated from sediments of the South China Sea [J].
Gu, Jun ;
Guo, Bin ;
Wang, Ya-Nan ;
Yu, Su-Lin ;
Inamori, Ryuhei ;
Qu, Ri ;
Ye, Yu-Guang ;
Wu, Xiao-Lei .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :157-160
[8]  
KOMAGATA K, 1987, METHOD MICROBIOL, V19, P161
[9]  
LANYI B, 1987, METHOD MICROBIOL, V19, P1
[10]   Oceanicola marinus sp nov., a marine alphaproteobacterium isolated from seawater collected off Taiwan [J].
Lin, Kuan-Yin ;
Sheu, Shih-Yi ;
Chang, Poh-Shing ;
Cho, Jang-Cheon ;
Chen, Wen-Ming .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :1625-1629