The Human Transcription Factors

被引:1866
作者
Lambert, Samuel A. [1 ]
Jolma, Arttu [2 ]
Campitelli, Laura F. [1 ]
Das, Pratyush K. [3 ]
Yin, Yimeng [4 ]
Albu, Mihai [2 ]
Chen, Xiaoting [5 ]
Taipale, Jussi [3 ,4 ,6 ]
Hughes, Timothy R. [1 ,2 ]
Weirauch, Matthew T. [5 ,7 ,8 ,9 ]
机构
[1] Univ Toronto, Dept Mol Genet, Toronto, ON, Canada
[2] Univ Toronto, Donnelly Ctr, Toronto, ON, Canada
[3] Univ Helsinki, Genome Scale Biol Program, Helsinki, Finland
[4] Karolinska Inst, Dept Med Biochem & Biophys, Div Funct Genom & Syst Biol, Solna, Sweden
[5] Cincinnati Childrens Hosp Med Ctr, Ctr Autoimmune Genom & Etiol CAGE, Cincinnati, OH 45229 USA
[6] Univ Cambridge, Dept Biochem, Cambridge CB2 1GA, England
[7] Cincinnati Childrens Hosp Med Ctr, Div Biomed Informat, Cincinnati, OH 45229 USA
[8] Cincinnati Childrens Hosp Med Ctr, Div Dev Biol, Cincinnati, OH 45229 USA
[9] Univ Cincinnati, Coll Med, Dept Pediat, Cincinnati, OH 45220 USA
基金
瑞典研究理事会; 加拿大自然科学与工程研究理事会;
关键词
PROTEIN-DNA INTERACTIONS; FACTOR SEQUENCE SPECIFICITY; ZINC-FINGER PROTEINS; EMBRYONIC STEM-CELLS; FACTOR-BINDING; HUMAN GENOME; FUNCTIONAL DIVERSITY; REGULATORY PROTEINS; GENE-EXPRESSION; IMMUNE-SYSTEM;
D O I
10.1016/j.cell.2018.01.029
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transcription factors (TFs) recognize specific DNA sequences to control chromatin and transcription, forming a complex system that guides expression of the genome. Despite keen interest in understanding how TFs control gene expression, it remains challenging to determine how the precise genomic binding sites of TFs are specified and how TF binding ultimately relates to regulation of transcription. This review considers how TFs are identified and functionally characterized, principally through the lens of a catalog of over 1,600 likely human TFs and binding motifs for two-thirds of them. Major classes of human TFs differ markedly in their evolutionary trajectories and expression patterns, underscoring distinct functions. TFs likewise underlie many different aspects of human physiology, disease, and variation, highlighting the importance of continued effort to understand TF-mediated gene regulation.
引用
收藏
页码:650 / 665
页数:16
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