Adaptive Feature Selection Guided Deep Forest for COVID-19 Classification With Chest CT

被引:138
作者
Sun, Liang [1 ]
Mo, Zhanhao [2 ]
Yan, Fuhua [3 ]
Xia, Liming [4 ]
Shan, Fei [5 ]
Ding, Zhongxiang [6 ]
Song, Bin [7 ]
Gao, Wanchun [8 ]
Shao, Wei [1 ]
Shi, Feng [9 ,10 ]
Yuan, Huan [9 ,10 ]
Jiang, Huiting [9 ,10 ]
Wu, Dijia [9 ,10 ]
Wei, Ying [9 ,10 ]
Gao, Yaozong [9 ,10 ]
Sui, He [2 ]
Zhang, Daoqiang [1 ]
Shen, Dinggang [9 ,10 ]
机构
[1] Nanjing Univ Aeronaut & Astronaut, MIIT Key Lab Pattern Anal & Machine Intelligence, Coll Comp Sci & Technol, Nanjing 211106, Peoples R China
[2] Jilin Univ, China Japan Union Hosp, Dept Radiol, Changchun 130021, Peoples R China
[3] Shanghai Jiao Tong Univ, Sch Med, Ruijin Hosp, Dept Radiol, Shanghai 200240, Peoples R China
[4] Huazhong Univ Sci & Technol, Tongji Med Coll, Tongji Hosp, Dept Radiol, Wuhan 430074, Peoples R China
[5] Fudan Univ, Shanghai Publ Hlth Clin Ctr, Dept Radiol, Shanghai 200433, Peoples R China
[6] Zhejiang Univ, Sch Med, Hangzhou Peoples Hosp 1, Dept Radiol, Hangzhou 310027, Peoples R China
[7] Sichuan Univ, West China Hosp, Dept Radiol, Chengdu 610041, Peoples R China
[8] Jishou Univ, Sch Med, Qianjiang Cent Hosp, Dept Radiol, Chongqing 409000, Peoples R China
[9] Shanghai United Imaging Intelligence Co Ltd, Dept Res & Dev, Shanghai 201399, Peoples R China
[10] Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South Korea
基金
中国国家自然科学基金; 中国博士后科学基金;
关键词
Feature extraction; Computed tomography; Lung; Forestry; Hospitals; Radiology; Diseases; COVID-19; classification; deep forest; feature selection; chest CT; CORONAVIRUS DISEASE;
D O I
10.1109/JBHI.2020.3019505
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Chest computed tomography (CT) becomes an effective tool to assist the diagnosis of coronavirus disease-19 (COVID-19). Due to the outbreak of COVID-19 worldwide, using the computed-aided diagnosis technique for COVID-19 classification based on CT images could largely alleviate the burden of clinicians. In this paper, we propose an Adaptive Feature Selection guided Deep Forest (AFS-DF) for COVID-19 classification based on chest CT images. Specifically, we first extract location-specific features from CT images. Then, in order to capture the high-level representation of these features with the relatively small-scale data, we leverage a deep forest model to learn high-level representation of the features. Moreover, we propose a feature selection method based on the trained deep forest model to reduce the redundancy of features, where the feature selection could be adaptively incorporated with the COVID-19 classification model. We evaluated our proposed AFS-DF on COVID-19 dataset with 1495 patients of COVID-19 and 1027 patients of community acquired pneumonia (CAP). The accuracy (ACC), sensitivity (SEN), specificity (SPE), AUC, precision and F1-score achieved by our method are 91.79%, 93.05%, 89.95%, 96.35%, 93.10% and 93.07%, respectively. Experimental results on the COVID-19 dataset suggest that the proposed AFS-DF achieves superior performance in COVID-19 vs. CAP classification, compared with 4 widely used machine learning methods.
引用
收藏
页码:2798 / 2805
页数:8
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