A novel thermophilic and halophilic esterase from Janibacter sp R02, the first member of a new lipase family (Family XVII)

被引:49
作者
Castilla, Agustin [1 ]
Panizza, Paola [1 ]
Rodriguez, Diego [1 ]
Bonino, Luis [1 ]
Diaz, Pilar [2 ]
Irazoqui, Gabriela [1 ]
Rodriguez Giordano, Sonia [1 ]
机构
[1] Univ Republica, Dept Biosci, Fac Quim, Gral Flores 2124, Montevideo 11800, Uruguay
[2] Univ Barcelona, Dept Genet Microbiol & Stat, Av Diagonal 643, E-08028 Barcelona, Spain
关键词
Esterase; Janibacter; Thermophilic; Halophilic; SWISS-MODEL; BIOTECHNOLOGICAL APPLICATIONS; BIOCHEMICAL-PROPERTIES; THERMOSTABLE LIPASE; PURIFICATION; CLONING; PROTEINS; ENZYMES; CLASSIFICATION; ENVIRONMENT;
D O I
10.1016/j.enzmictec.2016.12.010
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Janibacter sp. strain R02 (BNM 560) was isolated in our laboratory from an Antarctic soil sample. A remarkable trait of the strain was its high lipolytic activity, detected in Rhodamine-olive oil supplemented plates. Supernatants of Janibacter sp. R02 displayed superb activity on transesterification of acyl glycerols, thus being a good candidate for lipase prospection. Considering the lack of information concerning lipases of the genus Janibacter, we focused on the identification, cloning, expression and characterization of the extracellular lipases of this strain. By means of sequence alignment and clustering of consensus nucleotide sequences, a DNA fragment of 1272 by was amplified, cloned and expressed in E. coli. The resulting recombinant enzyme, named LipJ2, showed preference for short to medium chain-length substrates, and displayed maximum activity at 80 degrees C and pH 8-9, being strongly activated by a mixture of Na+ and K+. The enzyme presented an outstanding stability regarding both pH and temperature. Bioinformatics analysis of the amino acid sequence of LipJ2 revealed the presence of a consensus catalytic triad and a canonical pentapeptide. However, two additional rare motifs were found in LipJ2: an SXXL beta-lactamase motif and two putative Y-type oxyanion holes (YAP). Although some of the previous features could allow assigning LipJ2 to the bacterial lipase families VIII or X, the phylogenetic analysis showed that LipJ2 clusters apart from other members of known lipase families, indicating that the newly isolated Janibacter esterase LipJ2 would be the first characterized member of a new family of bacterial lipases. Published by Elsevier Inc.
引用
收藏
页码:86 / 95
页数:10
相关论文
共 62 条
[1]   Purification and properties of extracellular lipase from Streptomyces rimosus [J].
Abramic, M ;
Lescic, I ;
Korica, T ;
Vitale, L ;
Saenger, W ;
Pigac, J .
ENZYME AND MICROBIAL TECHNOLOGY, 1999, 25 (06) :522-529
[2]  
Altschul S F., 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs (tech. rep. No. 17)
[3]   Comparison of three DNA extraction methods for Mycobacterium bovis, Mycobacterium tuberculosis and Mycobacterium avium subsp avium [J].
Amaro, A. ;
Duarte, E. ;
Amado, A. ;
Ferronha, H. ;
Botelho, A. .
LETTERS IN APPLIED MICROBIOLOGY, 2008, 47 (01) :8-11
[4]  
[Anonymous], 2016, MOL BIOL EVOL, DOI DOI 10.1093/MOLBEV/MSW054
[5]  
Antranikian Garabed, 2008, P113
[6]   The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling [J].
Arnold, K ;
Bordoli, L ;
Kopp, J ;
Schwede, T .
BIOINFORMATICS, 2006, 22 (02) :195-201
[7]   Bacterial lipolytic enzymes: classification and properties [J].
Arpigny, JL ;
Jaeger, KE .
BIOCHEMICAL JOURNAL, 1999, 343 :177-183
[8]   Recent progress towards the application of hyperthermophiles and their enzymes [J].
Atomi, H .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2005, 9 (02) :166-173
[9]   Rhodococcus sp Strain CR-53 LipR, the First Member of a New Bacterial Lipase Family (Family X) Displaying an Unusual Y-Type Oxyanion Hole, Similar to the Candida antarctica Lipase Clan [J].
Bassegoda, Arnau ;
Javier Pastor, F. I. ;
Diaz, Pilar .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2012, 78 (06) :1724-1732
[10]   Cloning of the first sn1-DAG lipases points to the spatial and temporal regulation of endocannabinoid signaling in the brain [J].
Bisogno, T ;
Howell, F ;
Williams, G ;
Minassi, A ;
Cascio, MG ;
Ligresti, A ;
Matias, I ;
Schiano-Moriello, A ;
Paul, P ;
Williams, EJ ;
Gangadharan, U ;
Hobbs, C ;
Di Marzo, V ;
Doherty, P .
JOURNAL OF CELL BIOLOGY, 2003, 163 (03) :463-468