Bioactive compounds synthesized by non-ribosomal peptide synthetases and type-I polyketide synthases discovered through genome-mining and metagenomics

被引:66
作者
Nikolouli, Katerina [1 ]
Mossialos, Dimitris [1 ]
机构
[1] Univ Thessaly, Dept Biochem & Biotechnol, Larisa 41221, Greece
关键词
Bioactive compounds; Evolution; Genome mining; Metagenomics; Non-ribosomal peptide synthetase; Polyketide synthase; BIOSYNTHETIC GENE-CLUSTER; UNCULTIVATED BACTERIAL SYMBIONT; STREPTOMYCES-COELICOLOR GENOME; BRYOZOAN BUGULA-NERITINA; NATURAL-PRODUCT; ASPERGILLUS-NIDULANS; FUNCTIONAL METAGENOMICS; ANTIBIOTIC-RESISTANCE; SECONDARY METABOLOME; GRAMICIDIN-S;
D O I
10.1007/s10529-012-0919-2
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Non-ribosomal peptide synthetases (NRPS) and type-I polyketide synthases (PKS-I) are multimodular enzymes involved in biosynthesis of oligopeptide and polyketide secondary metabolites produced by microorganisms such as bacteria and fungi. New findings regarding the mechanisms underlying NRPS and PKS-I evolution illustrate how microorganisms expand their metabolic potential. During the last decade rapid development of bioinformatics tools as well as improved sequencing and annotation of microbial genomes led to discovery of novel bioactive compounds synthesized by NRPS and PKS-I through genome-mining. Taking advantage of these technological developments metagenomics is a fast growing research field which directly studies microbial genomes or specific gene groups and their products. Discovery of novel bioactive compounds synthesized by NRPS and PKS-I will certainly be accelerated through metagenomics, allowing the exploitation of so far untapped microbial resources in biotechnology and medicine.
引用
收藏
页码:1393 / 1403
页数:11
相关论文
共 77 条
[71]   Nonribosomal peptide biosynthesis:: Point mutations and module skipping lead to chemical diversity [J].
Wenzel, SC ;
Meiser, P ;
Binz, TM ;
Mahmud, T ;
Müller, R .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2006, 45 (14) :2296-2301
[72]   Structure and biosynthesis of myxochromides S1-3 in Stigmatella aurantiaca:: Evidence for an iterative bacterial type I polyketide synthase and for module skipping in nonribosomal peptide biosynthesis [J].
Wenzel, SC ;
Kunze, B ;
Höfle, G ;
Silakowski, B ;
Scharfe, M ;
Blöcker, H ;
Müller, R .
CHEMBIOCHEM, 2005, 6 (02) :375-385
[73]  
Wong FT, 2012, CURR OPIN C IN PRESS
[74]   Acetylaszonalenin Biosynthesis in Neosartorya fischeri IDENTIFICATION OF THE BIOSYNTHETIC GENE CLUSTER BY GENOMIC MINING AND FUNCTIONAL PROOF OF THE GENES BY BIOCHEMICAL INVESTIGATION [J].
Yin, Wen-Bing ;
Grundmann, Alexander ;
Cheng, Jun ;
Li, Shu-Ming .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (01) :100-109
[75]   STERIGMATOCYSTIN BIOSYNTHESIS IN ASPERGILLUS-NIDULANS REQUIRES A NOVEL TYPE-I POLYKETIDE SYNTHASE [J].
YU, JH ;
LEONARD, TJ .
JOURNAL OF BACTERIOLOGY, 1995, 177 (16) :4792-4800
[76]   Strategies for the Discovery of New Natural Products by Genome Mining [J].
Zerikly, Malek ;
Challis, Gregory L. .
CHEMBIOCHEM, 2009, 10 (04) :625-633
[77]   tRNA-dependent peptide bond formation by the transferase PacB in biosynthesis of the pacidamycin group of pentapeptidyl nucleoside antibiotics [J].
Zhang, Wenjun ;
Ntai, Ioanna ;
Kelleher, Neil L. ;
Walsh, Christopher T. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (30) :12249-12253