Shoot-and-Trap: Use of specific x-ray damage to study structural protein dynamics by temperature-control led cryo-crystallography

被引:51
作者
Colletier, Jacques-Philippe [1 ]
Bourgeois, Dominique [2 ,4 ]
Sanson, Benoit [1 ]
Fournier, Didier [3 ]
Sussman, Joel L. [6 ]
Silman, Israel [5 ]
Weik, Martin [1 ]
机构
[1] Univ Grenoble 1, Lab Mol Biophys, F-38027 Grenoble, France
[2] Univ Grenoble 1, CNRS,Inst Biol Struct Jean Pierre Ebel, Commissariat Energie Atom, Lab Cristallogenese & Cristallog Prot, F-38027 Grenoble, France
[3] CNRS, Inst Pharmacol & Biol Struct, Grp Biotechnol Prot, F-31077 Toulouse, France
[4] European Synchrotron Radiat Facil, F-38000 Grenoble, France
[5] Weizmann Inst Sci, Dept Neurobiol, IL-76100 Rehovot, Israel
[6] Weizmann Inst Sci, Dept Struct Biol, IL-76100 Rehovot, Israel
基金
美国国家卫生研究院;
关键词
acetylcholinesterase; kinetic crystallography; structure-dynamics-function relationships; energy landscape; synchrotron radiation;
D O I
10.1073/pnas.0804828105
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Although x-ray crystallography is the most widely used method for macromolecular structure determination, it does not provide dynamical information, and either experimental tricks or complementary experiments must be used to overcome the inherently static nature of crystallographic structures. Here we used specific x-ray damage during temperature-controlled crystallographic experiments at a third-generation synchrotron source to trigger and monitor (Shoot-and-Trap) structural changes putatively involved in an enzymatic reaction. In particular, a nonhydrolyzable substrate analogue of acetylcholinesterase, the "off-switch" at cholinergic synapses, was radiocleaved within the buried enzymatic active site. Subsequent product clearance, observed at 150 K but not at 100 K, indicated exit from the active site possibly via a "backdoor." The simple strategy described here is, in principle, applicable to any enzyme whose structure in complex with a substrate analogue is available and, therefore, could serve as a standard procedure in kinetic crystallography studies.
引用
收藏
页码:11742 / 11747
页数:6
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