Paenibacillus marinisediminis sp nov., a bacterium isolated from marine sediment

被引:11
作者
Lee, Hae-Won [1 ,2 ,3 ]
Roh, Seong Woon [1 ,2 ]
Yim, Kyung June [3 ]
Shin, Na-Ri [1 ,2 ]
Lee, Jina [1 ,2 ]
Whon, Tae Woong [1 ,2 ]
Kim, Joon Yong [1 ,2 ]
Hyun, Dong-Wook [1 ,2 ]
Kim, Daekyung [3 ]
Bae, Jin-Woo [1 ,2 ]
机构
[1] Kyung Hee Univ, Dept Life & Nanopharmaceut Sci, Seoul 130701, South Korea
[2] Kyung Hee Univ, Dept Biol, Seoul 130701, South Korea
[3] Korea Basic Sci Inst, Jeju Ctr, Cheju 690756, South Korea
基金
新加坡国家研究基金会;
关键词
bacterial taxonomy; marine sediment; Paenibacillus marinisediminis sp nov; SEQUENCES; PROPOSAL; PATTERN;
D O I
10.1007/s12275-013-3198-2
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-negative, nonmotile, endospore-forming, rod-shaped bacterial strain LHW35(T), which belonged to the genus Paenibacillus, was isolated from marine sediment collected from the south coast of the Republic of Korea. A phylogenetic analysis of 16S rRNA gene sequences indicated that strain LHW35(T) was most closely related to Paenibacillus taiwanensis G-soil-2-3(T) (97.2% similarity). The optimal growth conditions for strain LHW35(T) were 37A degrees C, pH 6.0, and 0% (w/v) NaCl. The main isoprenoid quinone was menaquinone-7 (MK-7) and the major polyamine was spermidine. The diamino acid present in the cell-wall peptidoglycan was meso-diaminopimelic acid. The major fatty acids were anteiso-C-15:0 and C-16:0. The polar lipids were phosphatidylethanolamine, phosphatidylglycerol, unidentified amino-hospholipids, unidentified phospholipids, and unidentified polar lipids. A DNA-DNA hybridization experiment using the type strain of P. taiwanensis indicated < 40% relatedness. The DNA G+C content was 45.0 mol%. Based on these phylogenetic, genomic, and phenotypic analyses, strain LHW35(T) should be classified as a novel species within the genus Paenibacillus, for which the name Paenibacillus marinisediminis sp. nov. is proposed. The type strain is LHW35(T) (=KACC 16317(T) =JCM 17886(T)).
引用
收藏
页码:312 / 317
页数:6
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