Tumor Lesion Segmentation from 3D PET Using a Machine Learning Driven Active Surface

被引:3
作者
Ahmadvand, Payam [1 ]
Duggan, Noirin [1 ]
Benard, Francois [2 ,3 ]
Hamarneh, Ghassan [1 ]
机构
[1] Simon Fraser Univ, Med Image Anal Lab, Burnaby, BC, Canada
[2] BC Canc Agcy, Vancouver, BC, Canada
[3] Univ British Columbia, Dept Radiol, Vancouver, BC, Canada
来源
MACHINE LEARNING IN MEDICAL IMAGING, MLMI 2016 | 2016年 / 10019卷
关键词
IMAGES; CANCER; QUANTIFICATION; DELINEATION; CT;
D O I
10.1007/978-3-319-47157-0_33
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
One of the key challenges facing wider adoption of positron emission tomography (PET) as an imaging biomarker of disease is the development of reproducible quantitative image interpretation tools. Quantifying changes in tumor tissue, due to disease progression or treatment regimen, often requires accurate and reproducible delineation of lesions. Lesion segmentation is necessary for measuring tumor proliferation/shrinkage and radiotracer-uptake to quantify tumor metabolism. In this paper, we develop a fully automatic method for lesion delineation, which does not require user-initialization or parameter-tweaking, to segment novel PET images. To achieve this, we train a machine learning system on anatomically and physiologically meaningful imaging cues, to distinguish normal organ activity from tumorous lesion activity. The inferred lesion likelihoods are then used to guide a convex segmentation model, guaranteeing reproducible results. We evaluate our approach on datasets from The Cancer Imaging Archive trained on data from the Quantitative Imaging Network challenge that were delineated by multiple users. Our method not only produces more accurate segmentation than state-of-the-art segmentation results, but does so without any user interaction.
引用
收藏
页码:271 / 278
页数:8
相关论文
共 24 条
[1]   Contourlet-based active contour model for PET image segmentation [J].
Abdoli, M. ;
Dierckx, R. A. J. O. ;
Zaidi, H. .
MEDICAL PHYSICS, 2013, 40 (08)
[2]   Joint segmentation of anatomical and functional images: Applications in quantification of lesions from PET, PET-CT, MRI-PET, and MRI-PET-CT images [J].
Bagci, Ulas ;
Udupa, Jayaram K. ;
Mendhiratta, Neil ;
Foster, Brent ;
Xu, Ziyue ;
Yao, Jianhua ;
Chen, Xinjian ;
Mollura, Daniel J. .
MEDICAL IMAGE ANALYSIS, 2013, 17 (08) :929-945
[3]  
Bi L, 2014, LECT NOTES COMPUT SC, V8673, P569, DOI 10.1007/978-3-319-10404-1_71
[4]   Random forests [J].
Breiman, L .
MACHINE LEARNING, 2001, 45 (01) :5-32
[5]   Fast global minimization of the active Contour/Snake model [J].
Bresson, Xavier ;
Esedoglu, Selim ;
Vandergheynst, Pierre ;
Thiran, Jean-Philippe ;
Osher, Stanley .
JOURNAL OF MATHEMATICAL IMAGING AND VISION, 2007, 28 (02) :151-167
[6]   The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository [J].
Clark, Kenneth ;
Vendt, Bruce ;
Smith, Kirk ;
Freymann, John ;
Kirby, Justin ;
Koppel, Paul ;
Moore, Stephen ;
Phillips, Stanley ;
Maffitt, David ;
Pringle, Michael ;
Tarbox, Lawrence ;
Prior, Fred .
JOURNAL OF DIGITAL IMAGING, 2013, 26 (06) :1045-1057
[7]   An analysis of co-occurrence texture statistics as a function of grey level quantization [J].
Clausi, DA .
CANADIAN JOURNAL OF REMOTE SENSING, 2002, 28 (01) :45-62
[8]   Primary lung tumor segmentation from PET-CT volumes with spatial-topological constraint [J].
Cui, Hui ;
Wang, Xiuying ;
Lin, Weiran ;
Zhou, Jianlong ;
Eberl, Stefan ;
Feng, Dagan ;
Fulham, Michael .
INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 2016, 11 (01) :19-29
[9]   A New Method for Volume Segmentation of PET Images, Based on Possibility Theory [J].
Dewalle-Vignion, Anne-Sophie ;
Betrouni, Nacim ;
Lopes, Renaud ;
Huglo, Damien ;
Stute, Simon ;
Vermandel, Maximilien .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2011, 30 (02) :409-423
[10]   DICOM for quantitative imaging biomarker development: a standards based approach to sharing clinical data and structured PET/CT analysis results in head and neck cancer research [J].
Fedorov, Andriy ;
Clunie, David ;
Ulrich, Ethan ;
Bauer, Christian ;
Wahle, Andreas ;
Brown, Bartley ;
Onken, Michael ;
Riesmeier, Joerg ;
Pieper, Steve ;
Kikinis, Ron ;
Buatti, John ;
Beichel, Reinhard R. .
PEERJ, 2016, 4