Genome-wide expression profile of steroid response in Saccharomyces cerevisiae

被引:21
|
作者
Banerjee, D
Pillai, B
Karnani, N
Mukhopadhyay, G
Prasad, R [1 ]
机构
[1] Jawaharlal Nehru Univ, Sch Life Sci, Membrane Biol Lab, New Delhi 110067, India
[2] Inst Genom & Integrat Biol, Delhi 110007, India
[3] Jawaharlal Nehru Univ, Special Ctr Mol Med, New Delhi 10067, India
关键词
Saccharomyces cerevisiae; stress response; progesterone; estradiol; steroid response element; microarray; profiling;
D O I
10.1016/j.bbrc.2004.03.053
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The response of the yeast Saccharomyces cerevisiae to human steroid hormone progesterone was studied by genomic expression profiling. The transcription profile data revealed that steroid response was a global phenomenon wherein a host of genes were affected. For example, 163 genes were upregulated and 40 genes were downregulated, by at least more than twofold. The major categories of upregulated genes included protein destination (15%), metabolism (14%), transport facilitation (12%), cell growth, cell division, and DNA synthesis (8%), and transcription (7%), while metabolism (22%), transcription (11%), intracellular transport (10%), cell growth, cell division, and DNA synthesis (10%), energy (8%), cell rescue, defense, and cell death (6%), and protein synthesis (6%) encoding genes were downregulated. Notwithstanding the fact that yeast cells do not possess commonly occurring steroid response cascade similar to higher eukaryotes, our results demonstrate that a short-term exposure to progesterone results in differential regulation of predominantly stress responsive genes. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:406 / 413
页数:8
相关论文
共 50 条
  • [21] Adaptive Response and Tolerance to Weak Acids in Saccharomyces cerevisiae: A Genome-Wide View
    Mira, Nuno P.
    Teixeira, Miguel Cacho
    Sa-Correia, Isabel
    OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2010, 14 (05) : 525 - 540
  • [22] Genome-wide transcriptional response to pesticide exposure in the model yeast Saccharomyces cerevisiae
    Gil, F. N.
    Becker, J. D.
    Viegas, C. A.
    FEBS JOURNAL, 2012, 279 : 230 - 230
  • [23] Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiae
    Evan H Hurowitz
    Patrick O Brown
    Genome Biology, 5 (1)
  • [24] Genome-wide screening of aluminum tolerance in Saccharomyces cerevisiae
    Kakimoto, M
    Kobayashi, A
    Fukuda, R
    Ono, Y
    Ohta, A
    Yoshimura, E
    BIOMETALS, 2005, 18 (05) : 467 - 474
  • [25] Genome-wide transcriptional responses to sulfite in Saccharomyces cerevisiae
    Hoon Park
    Yoon-Sun Hwang
    The Journal of Microbiology, 2008, 46 : 542 - 548
  • [26] Towards a genome-wide transcriptogram: the Saccharomyces cerevisiae case
    Rybarczyk-Filho, Jose Luiz
    Castro, Mauro A. A.
    Dalmolin, Rodrigo J. S.
    Moreira, Jose C. F.
    Brunnet, Leonardo G.
    de Almeida, Rita M. C.
    NUCLEIC ACIDS RESEARCH, 2011, 39 (08) : 3005 - 3016
  • [27] Genome-Wide Transcriptional Responses to Sulfite in Saccharomyces cerevisiae
    Park, Hoon
    Hwang, Yoon-Sun
    JOURNAL OF MICROBIOLOGY, 2008, 46 (05) : 542 - 548
  • [28] Genome-Wide Screening of Aluminum Tolerance in Saccharomyces cerevisiae
    Masayuki Kakimoto
    Atsushi Kobayashi
    Ryouichi Fukuda
    Yasuke Ono
    Akinori Ohta
    Etsuro Yoshimura
    Biometals, 2005, 18 : 467 - 474
  • [29] Genome-Wide Analysis of Nascent Transcription in Saccharomyces cerevisiae
    McKinlay, Anastasia
    Araya, Carlos L.
    Fields, Stanley
    G3-GENES GENOMES GENETICS, 2011, 1 (07): : 549 - 558
  • [30] Exploiting the determinants of stochastic gene expression in Saccharomyces cerevisiae for genome-wide prediction of expression noise
    Li, Jingjing
    Min, Renqiang
    Vizeacoumar, Franco J.
    Jin, Ke
    Xin, Xiaofeng
    Zhang, Zhaolei
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (23) : 10472 - 10477