Association between type 2 diabetes and rs10811661 polymorphism upstream of CDKN2A/B: a meta-analysis

被引:14
作者
Li, Hui [1 ,2 ]
Tang, Xiaojun [1 ,2 ]
Liu, Qin [1 ,2 ]
Wang, Yang [1 ,2 ]
机构
[1] Chongqing Med Univ, Sch Publ Hlth & Management, Chongqing, Peoples R China
[2] Consortium China, RPC Programme, Effect Hlth Care Res Programme, Chongqing, Peoples R China
关键词
CDKN2A/B; rs10811661; Type; 2; diabetes; Polymorphism; Meta-analysis; GENOME-WIDE ASSOCIATION; RISK LOCI; VARIANTS; IGF2BP2; CDKAL1; GENES; TCF7L2; HHEX; SLC30A8; FTO;
D O I
10.1007/s00592-012-0400-7
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
To assess the association between type 2 diabetes and rs10811661 polymorphism, upstream of CDKN2A/B, a literature-based search was conducted to collect data. The pooled OR (odds ratio) and 95 % confidence intervals (CI) were used to assess the strength of association between rs10811661 polymorphism and type 2 diabetes. OR with 95 % CI were performed for allele contrasts, additive genetic model, dominant genetic model and recessive genetic model, respectively. The effect model was used if there was heterogeneity between studies. Funnel plots were used to predict publication bias. 17 studies with 29,990 cases and 40,977 controls were enrolled in this meta-analysis. Significant association was found in all of the four genetic models: allele contrast (OR = 1.21, 95 % CI 1.18-1.24), additive genetic model (OR = 1.51, 95 % CI 1.40-1.63), dominant genetic model (OR = 1.37, 95 % CI 1.28-1.47) and recessive genetic model (OR = 1.25, 95 % CI 1.21-1.29). The meta-analysis indicated that rs10811661 polymorphism was significantly associated with the risk of type 2 diabetes.
引用
收藏
页码:657 / 662
页数:6
相关论文
共 29 条
[21]   Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels [J].
Saxena, Richa ;
Voight, Benjamin F. ;
Lyssenko, Valeriya ;
Burtt, Noel P. ;
de Bakker, Paul I. W. ;
Chen, Hong ;
Roix, Jeffrey J. ;
Kathiresan, Sekar ;
Hirschhorn, Joel N. ;
Daly, Mark J. ;
Hughes, Thomas E. ;
Groop, Leif ;
Altshuler, David ;
Almgren, Peter ;
Florez, Jose C. ;
Meyer, Joanne ;
Ardlie, Kristin ;
Bostroem, Kristina Bengtsson ;
Isomaa, Bo ;
Lettre, Guillaume ;
Lindblad, Ulf ;
Lyon, Helen N. ;
Melander, Olle ;
Newton-Cheh, Christopher ;
Nilsson, Peter ;
Orho-Melander, Marju ;
Rastam, Lennart ;
Speliotes, Elizabeth K. ;
Taskinen, Marja-Riitta ;
Tuomi, Tiinamaija ;
Guiducci, Candace ;
Berglund, Anna ;
Carlson, Joyce ;
Gianniny, Lauren ;
Hackett, Rachel ;
Hall, Liselotte ;
Holmkvist, Johan ;
Laurila, Esa ;
Sjoegren, Marketa ;
Sterner, Maria ;
Surti, Aarti ;
Svensson, Margareta ;
Svensson, Malin ;
Tewhey, Ryan ;
Blumenstiel, Brendan ;
Parkin, Melissa ;
DeFelice, Matthew ;
Barry, Rachel ;
Brodeur, Wendy ;
Camarata, Jody .
SCIENCE, 2007, 316 (5829) :1331-1336
[22]   A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants [J].
Scott, Laura J. ;
Mohlke, Karen L. ;
Bonnycastle, Lori L. ;
Willer, Cristen J. ;
Li, Yun ;
Duren, William L. ;
Erdos, Michael R. ;
Stringham, Heather M. ;
Chines, Peter S. ;
Jackson, Anne U. ;
Prokunina-Olsson, Ludmila ;
Ding, Chia-Jen ;
Swift, Amy J. ;
Narisu, Narisu ;
Hu, Tianle ;
Pruim, Randall ;
Xiao, Rui ;
Li, Xiao-Yi ;
Conneely, Karen N. ;
Riebow, Nancy L. ;
Sprau, Andrew G. ;
Tong, Maurine ;
White, Peggy P. ;
Hetrick, Kurt N. ;
Barnhart, Michael W. ;
Bark, Craig W. ;
Goldstein, Janet L. ;
Watkins, Lee ;
Xiang, Fang ;
Saramies, Jouko ;
Buchanan, Thomas A. ;
Watanabe, Richard M. ;
Valle, Timo T. ;
Kinnunen, Leena ;
Abecasis, Gonalo R. ;
Pugh, Elizabeth W. ;
Doheny, Kimberly F. ;
Bergman, Richard N. ;
Tuomilehto, Jaakko ;
Collins, Francis S. ;
Boehnke, Michael .
SCIENCE, 2007, 316 (5829) :1341-1345
[23]   Global estimates of the prevalence of diabetes for 2010 and 2030 [J].
Shaw, J. E. ;
Sicree, R. A. ;
Zimmet, P. Z. .
DIABETES RESEARCH AND CLINICAL PRACTICE, 2010, 87 (01) :4-14
[24]   Replication Study of Candidate Genes Associated With Type 2 Diabetes Based On Genome-Wide Screening [J].
Tabara, Yasuharu ;
Osawa, Haruhiko ;
Kawamoto, Ryuichi ;
Onuma, Hiroshi ;
Shimizu, Ikki ;
Miki, Tetsuro ;
Kohara, Katsuhiko ;
Makino, Hideichi .
DIABETES, 2009, 58 (02) :493-498
[25]   Type 2 diabetes and obesity: genomics and the clinic [J].
Travers, Mary E. ;
McCarthy, Mark I. .
HUMAN GENETICS, 2011, 130 (01) :41-58
[26]   Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis [J].
Voight, Benjamin F. ;
Scott, Laura J. ;
Steinthorsdottir, Valgerdur ;
Morris, Andrew P. ;
Dina, Christian ;
Welch, Ryan P. ;
Zeggini, Eleftheria ;
Huth, Cornelia ;
Aulchenko, Yurii S. ;
Thorleifsson, Gudmar ;
McCulloch, Laura J. ;
Ferreira, Teresa ;
Grallert, Harald ;
Amin, Najaf ;
Wu, Guanming ;
Willer, Cristen J. ;
Raychaudhuri, Soumya ;
McCarroll, Steve A. ;
Langenberg, Claudia ;
Hofmann, Oliver M. ;
Dupuis, Josee ;
Qi, Lu ;
Segre, Ayellet V. ;
van Hoek, Mandy ;
Navarro, Pau ;
Ardlie, Kristin ;
Balkau, Beverley ;
Benediktsson, Rafn ;
Bennett, Amanda J. ;
Blagieva, Roza ;
Boerwinkle, Eric ;
Bonnycastle, Lori L. ;
Bostrom, Kristina Bengtsson ;
Bravenboer, Bert ;
Bumpstead, Suzannah ;
Burtt, Noisel P. ;
Charpentier, Guillaume ;
Chines, Peter S. ;
Cornelis, Marilyn ;
Couper, David J. ;
Crawford, Gabe ;
Doney, Alex S. F. ;
Elliott, Katherine S. ;
Elliott, Amanda L. ;
Erdos, Michael R. ;
Fox, Caroline S. ;
Franklin, Christopher S. ;
Ganser, Martha ;
Gieger, Christian ;
Grarup, Niels .
NATURE GENETICS, 2010, 42 (07) :579-U155
[27]   Investigation of Type 2 Diabetes Risk Alleles Support CDKN2A/B, CDKAL1, and TCF7L2 As Susceptibility Genes in a Han Chinese Cohort [J].
Wen, Jie ;
Ronn, Tina ;
Olsson, Anders ;
Yang, Zhen ;
Lu, Bin ;
Du, Yieping ;
Groop, Leif ;
Ling, Charlotte ;
Hu, Renming .
PLOS ONE, 2010, 5 (02)
[28]   Global prevalence of diabetes - Estimates for the year 2000 and projections for 2030 [J].
Wild, S ;
Roglic, G ;
Green, A ;
Sicree, R ;
King, H .
DIABETES CARE, 2004, 27 (05) :1047-1053
[29]   Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes [J].
Zeggini, Eleftheria ;
Weedon, Michael N. ;
Lindgren, Cecilia M. ;
Frayling, Timothy M. ;
Elliott, Katherine S. ;
Lango, Hana ;
Timpson, Nicholas J. ;
Perry, John R. B. ;
Rayner, Nigel W. ;
Freathy, Rachel M. ;
Barrett, Jeffrey C. ;
Shields, Beverley ;
Morris, Andrew P. ;
Ellard, Sian ;
Groves, Christopher J. ;
Harries, Lorna W. ;
Marchini, Jonathan L. ;
Owen, Katharine R. ;
Knight, Beatrice ;
Cardon, Lon R. ;
Walker, Mark ;
Hitman, Graham A. ;
Morris, Andrew D. ;
Doney, Alex S. F. ;
McCarthy, Mark I. ;
Hattersley, Andrew T. .
SCIENCE, 2007, 316 (5829) :1336-1341