The impact of light and temperature on chromatin organization and plant adaptation

被引:25
作者
Perrella, Giorgio [1 ,2 ]
Zioutopoulou, Anna [1 ]
Headland, Lauren R. [1 ]
Kaiserli, Eirini [1 ]
机构
[1] Univ Glasgow, Coll Med Vet & Life Sci, Inst Mol Cell & Syst Biol, Glasgow G12 8QQ, Lanark, Scotland
[2] ENEA, Trisaia Res Ctr, I-75026 Rotondella, Matera, Italy
基金
英国生物技术与生命科学研究理事会;
关键词
Chromatin regulation; flowering; gene expression; light signalling; nuclear organization; photomorphogenesis; thermomorphogenesis; TRANSCRIPTIONAL REGULATION; NUCLEAR ARCHITECTURE; GENE-EXPRESSION; ARABIDOPSIS; DYNAMICS; STRESS; LOCUS; H2A.Z; HETEROCHROMATIN; REORGANIZATION;
D O I
10.1093/jxb/eraa154
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Light and temperature shape the developmental trajectory and morphology of plants. Changes in chromatin organization and nuclear architecture can modulate gene expression and lead to short- and long-term plant adaptation to the environment. Here, we review recent reports investigating how changes in chromatin composition, structure, and topology modulate gene expression in response to fluctuating light and temperature conditions resulting in developmental and physiological responses. Furthermore, the potential application of novel revolutionary techniques, such Hi-C, RNA fluorescence in situ hybridization (FISH) and padlock-FISH, to study the impact of environmental stimuli such as light and temperature on nuclear compartmentalization in plants is discussed.
引用
收藏
页码:5247 / 5255
页数:9
相关论文
共 74 条
[1]   Potent induction of Arabidopsis thaliana flowering by elevated growth temperature [J].
Balasubramanian, Sureshkumar ;
Sureshkumar, Sridevi ;
Lempe, Janne ;
Weigel, Detlef .
PLOS GENETICS, 2006, 2 (07) :980-989
[2]   The impact of chromatin dynamics on plant light responses and circadian clock function [J].
Barneche, Fredy ;
Malapeira, Jordi ;
Mas, Paloma .
JOURNAL OF EXPERIMENTAL BOTANY, 2014, 65 (11) :2895-2913
[3]   Arabidopsis GCN5, HD1, and TAF1/HAF2 interact to regulate histone acetylation required for light-responsive gene expression [J].
Benhamed, Moussa ;
Bertrand, Claire ;
Servet, Caroline ;
Zhou, Dao-Xiu .
PLANT CELL, 2006, 18 (11) :2893-2903
[4]   The complex language of chromatin regulation during transcription [J].
Berger, Shelley L. .
NATURE, 2007, 447 (7143) :407-412
[5]   Slow Chromatin Dynamics Allow Polycomb Target Genes to Filter Fluctuations in Transcription Factor Activity [J].
Berry, Scott ;
Dean, Caroline ;
Howard, Martin .
CELL SYSTEMS, 2017, 4 (04) :445-+
[6]   Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery [J].
Bi, Xiuli ;
Cheng, Ying-Juan ;
Hu, Bo ;
Ma, Xiaoli ;
Wu, Rui ;
Wang, Jia-Wei ;
Liu, Chang .
GENOME RESEARCH, 2017, 27 (07) :1162-1173
[7]   Light signaling controls nuclear architecture reorganization during seedling establishment [J].
Bourbousse, Clara ;
Mestiri, Imen ;
Zabulon, Gerald ;
Bourge, Mickael ;
Formiggini, Fabio ;
Koini, Maria A. ;
Brown, Spencer C. ;
Fransz, Paul ;
Bowler, Chris ;
Barneche, Fredy .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (21) :E2836-E2844
[8]   Histone H2B Monoubiquitination Facilitates the Rapid Modulation of Gene Expression during Arabidopsis Photomorphogenesis [J].
Bourbousse, Clara ;
Ahmed, Ikhlak ;
Roudier, Francois ;
Zabulon, Gerald ;
Blondet, Eddy ;
Balzergue, Sandrine ;
Colot, Vincent ;
Bowler, Chris ;
Barneche, Fredy .
PLOS GENETICS, 2012, 8 (07)
[9]   Polycomb Repressive Complex 2 Controls the Embryo-to-Seedling Phase Transition [J].
Bouyer, Daniel ;
Roudier, Francois ;
Heese, Maren ;
Andersen, Ellen D. ;
Gey, Delphine ;
Nowack, Moritz K. ;
Goodrich, Justin ;
Renou, Jean-Pierre ;
Grini, Paul E. ;
Colot, Vincent ;
Schnittger, Arp .
PLOS GENETICS, 2011, 7 (03)
[10]  
Casal Jorge J, 2012, Arabidopsis Book, V10, pe0157, DOI 10.1199/tab.0157