Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys

被引:52
作者
Niederberger, Thomas D. [1 ]
Sohm, Jill A. [2 ,3 ]
Tirindelli, Joelle [4 ]
Gunderson, Troy [2 ,3 ]
Capone, Douglas G. [2 ,3 ]
Carpenter, Edward J. [4 ]
Cary, Stephen C. [1 ,5 ]
机构
[1] Univ Delaware, Coll Marine & Earth Sci, Lewes, DE 19958 USA
[2] Univ So Calif, Wrigley Inst Environm Studies, Los Angeles, CA USA
[3] Univ So Calif, Dept Biol Sci, Los Angeles, CA 90089 USA
[4] San Francisco State Univ, Romberg Tiburon Ctr, Tiburon, CA USA
[5] Univ Waikato, Dept Biol Sci, Hamilton, New Zealand
基金
美国国家科学基金会;
关键词
diazotrophs; Dry Valley; Antarctica; activity; community; MICROBIAL COMMUNITY STRUCTURE; NIFH GENE DIVERSITY; MCMURDO ICE SHELF; BACTERIAL DIVERSITY; GEOBACTER-SULFURREDUCENS; TRANSIENT STORAGE; VICTORIA LAND; LAKE BONNEY; NITROGEN; FIXATION;
D O I
10.1111/j.1574-6941.2012.01390.x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Eolian transport of biomass from ephemerally wetted soils, associated with summer glacial meltwater runoffs and lake edges, to low-productivity areas of the Antarctic Dry Valleys (DV) has been postulated to be an important source of organic matter (fixed nitrogen and fixed carbon) to the entire DV ecosystem. However, descriptions and identification of the microbial members responsible for N2 fixation within these wetted sites are limited. In this study, N2 fixers from wetted soils were identified by direct nifH gene sequencing and their in situ N2 fixation activities documented via acetylene reduction and RNA-based quantitative PCR assays. Shannon-index nifH diversity levels ranged between 1.8 and 2.6 and included the expected cyanobacterial signatures and a large number of phylotypes related to the gamma-, beta-, alpha-, and delta-proteobacteria. N2 fixation rates ranged between approximately 0.5 and 6nmolNcm-3h-1 with measurements indicating that approximately 50% of this activity was linked with sulfate reduction at some sites. Comparisons with proximal dry soils also suggested that these communities are not ubiquitously distributed, and conditions unrelated to moisture content may define the composition, diversity, or habitat suitability of the microbial communities within wetted soils of the DVs.
引用
收藏
页码:376 / 390
页数:15
相关论文
共 67 条
[1]   Diversity and distribution of Victoria Land biota [J].
Adams, Byron J. ;
Bardgett, Richard D. ;
Ayres, Edward ;
Wall, Diana H. ;
Aislabie, Jackie ;
Bamforth, Stuart ;
Bargagli, Roberto ;
Cary, Craig ;
Cavacini, Paolo ;
Connell, Laurie ;
Convey, Peter ;
Fell, Jack W. ;
Frati, Francesco ;
Hogg, Ian D. ;
Newsham, Kevin K. ;
O'Donnell, Anthony ;
Russell, Nicholas ;
Seppelt, Rodney D. ;
Stevens, Mark I. .
SOIL BIOLOGY & BIOCHEMISTRY, 2006, 38 (10) :3003-3018
[2]  
[Anonymous], 2006, Primer
[3]  
Barrett J. E, 2007, J GEOPHYS RES, V112, P1
[4]   Trends in resin and KCl-extractable soil nitrogen across landscape gradients in Taylor Valley, Antarctica [J].
Barrett, JE ;
Virginia, RA ;
Wall, DH .
ECOSYSTEMS, 2002, 5 (03) :289-299
[5]   Burrowing deeper into benthic nitrogen cycling: the impact of bioturbation on nitrogen fixation coupled to sulfate reduction [J].
Bertics, Victoria J. ;
Sohm, Jill A. ;
Treude, Tina ;
Chow, Cheryl-Emiliane T. ;
Capone, Douglas G. ;
Fuhrman, Jed A. ;
Ziebis, Wiebke .
MARINE ECOLOGY PROGRESS SERIES, 2010, 409 :1-15
[6]   The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments [J].
Bustin, Stephen A. ;
Benes, Vladimir ;
Garson, Jeremy A. ;
Hellemans, Jan ;
Huggett, Jim ;
Kubista, Mikael ;
Mueller, Reinhold ;
Nolan, Tania ;
Pfaffl, Michael W. ;
Shipley, Gregory L. ;
Vandesompele, Jo ;
Wittwer, Carl T. .
CLINICAL CHEMISTRY, 2009, 55 (04) :611-622
[8]  
Capone DG., 1993, HDB METHODS AQUATIC, P621
[9]   On the rocks: the microbiology of Antarctic Dry Valley soils [J].
Cary, S. Craig ;
McDonald, Ian R. ;
Barrett, John E. ;
Cowan, Don A. .
NATURE REVIEWS MICROBIOLOGY, 2010, 8 (02) :129-138
[10]   Dinitrogen-Fixing Cyanobacteria in Microbial Mats of Two Shallow Coral Reef Ecosystems [J].
Charpy, Loic ;
Palinska, Katarzyna A. ;
Casareto, Beatriz ;
Langlade, Marie Jose ;
Suzuki, Yoshimi ;
Abed, Raeid M. M. ;
Golubic, Stjepko .
MICROBIAL ECOLOGY, 2010, 59 (01) :174-186