Toward minimal bacterial cells: evolution vs. design

被引:73
作者
Moya, Andres [1 ,2 ,3 ]
Gil, Rosario [1 ,2 ,3 ]
Latorre, Amparo [1 ,2 ,3 ]
Pereto, Juli [1 ,2 ,4 ]
Pilar Garcillan-Barcia, Maria [5 ]
de la Cruz, Fernando [5 ]
机构
[1] Univ Valencia, Inst Cavanilles Biodiversitat & Biol Evolut, Valencia 46071, Spain
[2] CIBER Epidemiol & Salud Publ, Madrid, Spain
[3] Univ Valencia, Dept Genet, Valencia 46071, Spain
[4] Univ Valencia, Dept Bioquim & Biol Mol, Valencia 46071, Spain
[5] Univ Cantabria, Dept Mol Biol, E-39005 Santander, Spain
关键词
reduced genomes; minimal genome; synthetic genome; synthetic biology; synthetic cell; SYNTHETIC BIOLOGY; GENOME REDUCTION; NANOARCHAEUM-EQUITANS; SECONDARY SYMBIONT; CHEMICAL-SYNTHESIS; MICROBIAL GENOME; ESSENTIAL GENES; DELETION METHOD; REDUCED-GENOME; PLASMID;
D O I
10.1111/j.1574-6976.2008.00151.x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Recent technical and conceptual advances in the biological sciences opened the possibility of the construction of newly designed cells. In this paper we review the state of the art of cell engineering in the context of genome research, paying particular attention to what we can learn on naturally reduced genomes from either symbiotic or free living bacteria. Different minimal hypothetically viable cells can be defined on the basis of several computational and experimental approaches. Projects aiming at simplifying living cells converge with efforts to make synthetic genomes for minimal cells. The panorama of this particular view of synthetic biology lead us to consider the use of defined minimal cells to be applied in biomedical, bioremediation, or bioenergy application by taking advantage of existing naturally minimized cells.
引用
收藏
页码:225 / 235
页数:11
相关论文
共 87 条
  • [1] Synthetic biology: new engineering rules for an emerging discipline
    Andrianantoandro, Ernesto
    Basu, Subhayu
    Karig, David K.
    Weiss, Ron
    [J]. MOLECULAR SYSTEMS BIOLOGY, 2006, 2 (1) : 2006.0028
  • [2] Bacillus minimum genome factory:: effective utilization of microbial genome information
    Ara, Katsutoshi
    Ozaki, Katsuya
    Nakamura, Kouji
    Yamane, Kunio
    Sekiguchi, Junichi
    Ogasawara, Naotake
    [J]. BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY, 2007, 46 : 169 - 178
  • [3] Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants:: the Keio collection
    Baba, Tomoya
    Ara, Takeshi
    Hasegawa, Miki
    Takai, Yuki
    Okumura, Yoshiko
    Baba, Miki
    Datsenko, Kirill A.
    Tomita, Masaru
    Wanner, Barry L.
    Mori, Hirotada
    [J]. MOLECULAR SYSTEMS BIOLOGY, 2006, 2 (1) : 2006.0008
  • [4] Biology of bacteriocyte-associated endosymbionts of plant sap-sucking insects
    Baumann, P
    [J]. ANNUAL REVIEW OF MICROBIOLOGY, 2005, 59 : 155 - 189
  • [5] INCN PLASMID PKM101 AND INCI1 PLASMID COLIB-P9 ENCODE HOMOLOGOUS ANTIRESTRICTION PROTEINS IN THEIR LEADING REGIONS
    BELOGUROV, AA
    DELVER, EP
    RODZEVICH, OV
    [J]. JOURNAL OF BACTERIOLOGY, 1992, 174 (15) : 5079 - 5085
  • [6] Bhutkar Arjun, 2005, J Biolaw Bus, V8, P19
  • [7] Nanoarchaea: representatives of a novel archaeal phylum or a fast-evolving euryarchaeal lineage related to Thermococcales?
    Brochier, C
    Gribaldo, S
    Zivanovic, Y
    Confalonieri, F
    Forterre, P
    [J]. GENOME BIOLOGY, 2005, 6 (05)
  • [9] Protein-mediated error correction for de novo DNA synthesis -: art. no. e162
    Carr, PA
    Park, JS
    Lee, YJ
    Yu, T
    Zhang, SG
    Jacobson, JM
    [J]. NUCLEIC ACIDS RESEARCH, 2004, 32 (20) : e162
  • [10] Chemical synthesis of poliovirus cDNA: Generation of infectious virus in the absence of natural template
    Cello, J
    Paul, AV
    Wimmer, E
    [J]. SCIENCE, 2002, 297 (5583) : 1016 - 1018