SpeckleGAN: a generative adversarial network with an adaptive speckle layer to augment limited training data for ultrasound image processing

被引:45
作者
Bargsten, Lennart [1 ]
Schlaefer, Alexander [1 ]
机构
[1] Hamburg Univ Technol, Inst Med Technol & Intelligent Syst, Hamburg, Germany
关键词
Deep learning; Synthetic image generation; Theory-guided neural networks; Speckle noise; Small datasets; Image segmentation;
D O I
10.1007/s11548-020-02203-1
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Purpose In the field of medical image analysis, deep learning methods gained huge attention over the last years. This can be explained by their often improved performance compared to classic explicit algorithms. In order to work well, they need large amounts of annotated data for supervised learning, but these are often not available in the case of medical image data. One way to overcome this limitation is to generate synthetic training data, e.g., by performing simulations to artificially augment the dataset. However, simulations require domain knowledge and are limited by the complexity of the underlying physical model. Another method to perform data augmentation is the generation of images by means of neural networks. Methods We developed a new algorithm for generation of synthetic medical images exhibiting speckle noise via generative adversarial networks (GANs). Key ingredient is a speckle layer, which can be incorporated into a neural network in order to add realistic and domain-dependent speckle. We call the resulting GAN architecture SpeckleGAN. Results We compared our new approach to an equivalent GAN without speckle layer. SpeckleGAN was able to generate ultrasound images with very crisp speckle patterns in contrast to the baseline GAN, even for small datasets of 50 images. SpeckleGAN outperformed the baseline GAN by up to 165 % with respect to the Frechet Inception distance. For artery layer and lumen segmentation, a performance improvement of up to 4 % was obtained for small datasets, when these were augmented with images by SpeckleGAN. Conclusion SpeckleGAN facilitates the generation of realistic synthetic ultrasound images to augment small training sets for deep learning based image processing. Its application is not restricted to ultrasound images but could be used for every imaging methodology that produces images with speckle such as optical coherence tomography or radar.
引用
收藏
页码:1427 / 1436
页数:10
相关论文
共 22 条
  • [1] Standardized evaluation methodology and reference database for evaluating IVUS image segmentation
    Balocco, Simone
    Gatta, Carlo
    Ciompi, Francesco
    Wahle, Andreas
    Radeva, Petia
    Carlier, Stephane
    Unal, Gozde
    Sanidas, Elias
    Mauri, Josepa
    Carillo, Xavier
    Kovarnik, Tomas
    Wang, Ching-Wei
    Chen, Hsiang-Chou
    Exarchos, Themis P.
    Fotiadis, Dimitrios I.
    Destrempes, Francois
    Cloutier, Guy
    Pujol, Oriol
    Alberti, Marina
    Mendizabal-Ruiz, E. Gerardo
    Rivera, Mariano
    Aksoy, Timur
    Downe, Richard W.
    Kakadiaris, Ioannis A.
    [J]. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2014, 38 (02) : 70 - 90
  • [2] SPECKLE IN ULTRASOUND B-MODE SCANS
    BURCKHARDT, CB
    [J]. IEEE TRANSACTIONS ON SONICS AND ULTRASONICS, 1978, 25 (01): : 1 - 6
  • [3] Segmentation of Lumen and External Elastic Laminae in Intravascular Ultrasound Images Using Ultrasonic Backscattering Physics Initialized Multiscale Random Walks
    China, Debarghya
    Mitra, Pabitra
    Sheet, Debdoot
    [J]. COMPUTER VISION, GRAPHICS, AND IMAGE PROCESSING, ICVGIP 2016, 2017, 10481 : 393 - 403
  • [4] Deng J, 2009, PROC CVPR IEEE, P248, DOI 10.1109/CVPRW.2009.5206848
  • [5] DUBUISSON MP, 1994, INT C PATT RECOG, P566, DOI 10.1109/ICPR.1994.576361
  • [6] Goodfellow IJ, 2014, ADV NEUR IN, V27, P2672
  • [7] GOODMAN J W, 1968, Introduction to Fourier Optics
  • [8] Goodman J W, 2007, Speckle phenomena in optics: theory and applicationsM, V8th
  • [9] Deep Residual Learning for Image Recognition
    He, Kaiming
    Zhang, Xiangyu
    Ren, Shaoqing
    Sun, Jian
    [J]. 2016 IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2016, : 770 - 778
  • [10] Heusel Martin, 2017, ADV NEURAL INFORM PR, P6626, DOI DOI 10.48550/ARXIV.1706.08500