Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

被引：15

作者：

Neupane, Saraswoti ^{[1
]}

Finlay, Roger D. ^{[1
]}

Kyrpides, Nikos C. ^{[2
]}

Goodwin, Lynne ^{[2
,3
]}

Alstrom, Sadhna ^{[1
]}

Lucas, Susan ^{[2
]}

Land, Miriam ^{[2
,4
]}

Han, James ^{[2
]}

Lapidus, Alla ^{[2
]}

Cheng, Jan-Fang ^{[2
]}

Bruce, David ^{[2
,3
]}

Pitluck, Sam ^{[2
]}

Peters, Lin ^{[2
]}

Ovchinnikova, Galina ^{[2
]}

Held, Brittany ^{[2
,3
]}

Han, Cliff ^{[2
,3
]}

Detter, John C. ^{[2
,3
]}

Tapia, Roxanne ^{[2
,3
]}

Hauser, Loren ^{[2
,4
]}

Ivanova, Natalia ^{[2
]}

Pagani, Ioanna ^{[2
]}

Woyke, Tanja ^{[2
]}

Klenk, Hans-Peter ^{[5
]}

Hogberg, Nils ^{[1
]}

机构：

[1] Swedish Univ Agr Sci, Dept Forest Mycol & Pathol, Uppsala, Sweden

[2] DOE Joint Genome Inst, Walnut Creek, CA USA

[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA

[4] Oak Ridge Natl Lab, Oak Ridge, TN USA

[5] Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany

来源：

STANDARDS IN GENOMIC SCIENCES | 2012年 / 7卷 / 01期

关键词：

Gram-negative; non-sporulating; motile; plant-associated; chemoorganotrophic; Enterobacteriaceae; OILSEED RAPE; ANNOTATION; PREDICTION; BACTERIA; SYSTEM; TOOL;

D O I：

10.4056/sigs.2966299

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" within the 2010 DOE-JGI Community Sequencing Program (CSP2010).

引用

页码：22 / 30

页数：9

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