Lung Nodule Detection using 3D Convolutional Neural Networks Trained on Weakly Labeled Data

被引:30
作者
Anirudhi, Rushil [1 ]
Thiagarajan, Jayaraman J. [2 ]
Bremer, Timo [2 ]
Kim, Hyojin [2 ]
机构
[1] Arizona State Univ, Sch Elect Comp & Energy Engn, Tempe, AZ 85287 USA
[2] Lawrence Livermore Natl Lab, Ctr Appl Sci Comp, Livermore, CA USA
来源
MEDICAL IMAGING 2016: COMPUTER-AIDED DIAGNOSIS | 2015年 / 9785卷
关键词
PULMONARY NODULE;
D O I
10.1117/12.2214876
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
Early detection of lung nodules is currently the one of the most effective ways to predict and treat lung cancer. As a result, the past decade has seen a lot of focus on computer aided diagnosis (CAD) of lung nodules, whose goal is to efficiently detect, segment lung nodules and classify them as being benign or malignant. Effective detection of such nodules remains a challenge due to their arbitrariness in shape, size and texture. In this paper, we propose to employ 3D convolutional neural networks (CNN) to learn highly discriminative features for nodule detection in lieu of hand-engineered ones such as geometric shape or texture. While 3D CNNs are promising tools to model the spatio-temporal statistics of data, they are limited by their need for detailed 3D labels, which can be prohibitively expensive when compared obtaining 2D labels. Existing CAD methods rely on obtaining detailed labels for lung nodules, to train models, which is also unrealistic and time consuming. To alleviate this challenge, we propose a solution wherein the expert needs to provide only a point label, i.e., the central pixel of of the nodule, and its largest expected size. We use unsupervised segmentation to grow out a 3D region, which is used to train the CNN. Using experiments on the SPIE-LUNGx dataset, we show that the network trained using these weak labels can produce reasonably low false positive rates with a high sensitivity, even in the absence of accurate 3D labels.
引用
收藏
页数:6
相关论文
共 11 条
[1]   SLIC Superpixels Compared to State-of-the-Art Superpixel Methods [J].
Achanta, Radhakrishna ;
Shaji, Appu ;
Smith, Kevin ;
Lucchi, Aurelien ;
Fua, Pascal ;
Suesstrunk, Sabine .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2012, 34 (11) :2274-2281
[2]  
[Anonymous], 2015, Proceedings-International Symposium on Biomedical Imaging, 2015-July
[3]   Special Section Guest Editorial: LUNGx Challenge for computerized lung nodule classification: Reflections and lessons learned [J].
Armato, Samuel G. ;
Hadjiiski, Lubomir ;
Tourassi, Georgia D. ;
Drukker, Karen ;
Giger, Maryellen L. ;
Li, Feng ;
Redmond, George ;
Farahani, Keyvan ;
Kirby, Justin S. ;
Clarke, Laurence P. .
Journal of Medical Imaging, 2015, 2 (02)
[4]   Automated pulmonary nodule detection based on three-dimensional shape-based feature descriptor [J].
Choi, Wook-Jin ;
Choi, Tae-Sun .
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2014, 113 (01) :37-54
[5]   Computer-aided detection and analysis of pulmonary nodule from CT images: A survey [J].
Dhara, Ashis Kumar ;
Mukhopadhyay, Sudipta ;
Khandelwal, Niranjan .
IETE TECHNICAL REVIEW, 2012, 29 (04) :265-275
[6]   ImageNet Classification with Deep Convolutional Neural Networks [J].
Krizhevsky, Alex ;
Sutskever, Ilya ;
Hinton, Geoffrey E. .
COMMUNICATIONS OF THE ACM, 2017, 60 (06) :84-90
[7]   Lung Nodule Classification Using Deep Features in CT Images [J].
Kumar, Devinder ;
Wong, Alexander ;
Clausi, David A. .
2015 12TH CONFERENCE ON COMPUTER AND ROBOT VISION CRV 2015, 2015, :133-138
[8]   Deep learning [J].
LeCun, Yann ;
Bengio, Yoshua ;
Hinton, Geoffrey .
NATURE, 2015, 521 (7553) :436-444
[9]  
Roth HR, 2014, LECT NOTES COMPUT SC, V8673, P520, DOI 10.1007/978-3-319-10404-1_65
[10]  
Srivastava N, 2014, J MACH LEARN RES, V15, P1929