Complete genome sequence of Serratia plymuthica strain AS12

被引：16

作者：

Neupane, Saraswoti ^{[1
]}

Finlay, Roger D. ^{[1
]}

Alstrom, Sadhna ^{[1
]}

Goodwin, Lynne ^{[2
,3
]}

Kyrpides, Nikos C. ^{[2
]}

Lucas, Susan ^{[2
]}

Lapidus, Alla ^{[2
]}

Bruce, David ^{[2
,3
]}

Pitluck, Sam ^{[2
]}

Peters, Lin ^{[2
]}

Ovchinnikova, Galina ^{[2
]}

Chertkov, Olga ^{[2
,3
]}

Han, James ^{[2
]}

Han, Cliff ^{[2
,3
]}

Tapia, Roxanne ^{[2
,3
]}

Detter, John C. ^{[2
,3
]}

Land, Miriam ^{[2
,4
]}

Hauser, Loren ^{[2
,4
]}

Cheng, Jan-Fang ^{[2
]}

Ivanova, Natalia ^{[2
]}

Pagani, Ioanna ^{[2
]}

Klenk, Hans-Peter ^{[5
]}

Woyke, Tanja ^{[2
]}

Hogberg, Nils ^{[1
]}

机构：

[1] Swedish Univ Agr Sci, Uppsala BioCtr, Dept Forest Mycol & Plant Pathol, Uppsala, Sweden

[2] DOE Joint Genome Inst, Walnut Creek, CA USA

[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA

[4] Oak Ridge Natl Lab, Oak Ridge, TN USA

[5] Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany

来源：

STANDARDS IN GENOMIC SCIENCES | 2012年 / 6卷 / 02期

关键词：

Facultative anaerobe; gram-negative; motile; non-sporulating; mesophilic; chemoorganotrophic; agriculture; Enterobacteriaceae; CSP; 2010; OILSEED RAPE; ANNOTATION; PREDICTION; BACTERIA; SYSTEM; TOOL;

D O I：

10.4056/sigs.2705996

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

A plant-associated member of the family Enterobacteriaceae, Serratia plymuthica strain AS12 was isolated from rapeseed roots. It is of scientific interest because it promotes plant growth and inhibits plant pathogens. The genome of S. plymuthica AS12 comprises a 5,443,009 bp long circular chromosome, which consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced within the 2010 DOE-JGI Community Sequencing Program (CSP2010) as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens".

引用

页码：165 / 173

页数：9

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