Saccharothrix hoggarensis sp nov., an actinomycete isolated from Saharan soil

被引:16
作者
Boubetra, Dalila [1 ]
Zitouni, Abdelghani [1 ]
Bouras, Noureddine [1 ]
Mathieu, Florence [2 ]
Lebrihi, Ahmed [2 ]
Schumann, Peter [3 ]
Sproeer, Cathrin [3 ]
Klenk, Hans-Peter [3 ]
Sabaou, Nasserdine [1 ]
机构
[1] Ecole Normale Super Kouba, LBSM, Algiers 16050, Algeria
[2] Univ Toulouse, INPT ENSAT, Lab Genie Chim, UMR CNRS INPT UPS 5503, F-31326 Castanet Tolosan, France
[3] DSMZ German Collect Microorganisms & Cell Culture, D-38124 Braunschweig, Germany
关键词
GEN; NOV; DNA HYBRIDIZATION; PROPOSAL; NOCARDIA; LENTZEA;
D O I
10.1099/ijs.0.039099-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
An actinomycete, designated SA181(T), was isolated from Saharan soil in the Hoggar region (south Algeria) and was characterized taxonomically by using a polyphasic approach. The morphological and chemotaxonomic characteristics of the isolate were consistent with the genus Saccharothrix, and 16S rRNA gene sequence analysis confirmed that strain SA181(T) was a novel member of the genus Saccharothrix. DNA-DNA hybridization values between strain SA181(T) and its closest phylogenetic neighbours, the type strains of Saccharothrix longispora, Saccharothrix texasensis and Saccharothrix xinjiangensis, were clearly below the 70% threshold. The genotypic and phenotypic data showed that the isolate represents a novel species of the genus Saccharothrix, for which the name Saccharothrix hoggarensis sp. nov. is proposed, with the type strain SA181(T)(=DSM 45457(T) =CCUG 60214(T)).
引用
收藏
页码:549 / 553
页数:5
相关论文
共 39 条
  • [31] SHIRLING E. B., 1966, INT J SYST BACTERIOL, V16, P313
  • [32] TRANSFER OF STREPTOSPORANGIUM-VIRIDOGRISEUM (OKUDA ET-AL 1966), STREPTOSPORANGIUM-VIRIDOGRISEUM SUBSP KOFUENSE (NONOMURA AND OHARA 1969), AND STREPTOSPORANGIUM-ALBIDUM (FURUMAI ET-AL 1968) TO KUTZNERIA GEN-NOV AS KUTZNERIA-VIRIDOGRISEA COMB-NOV, KUTZNERIA-KOFUENSIS COMB-NOV, AND KUTZNERIA-ALBIDA COMB-NOV, RESPECTIVELY, AND EMENDATION OF THE GENUS STREPTOSPORANGIUM
    STACKEBRANDT, E
    KROPPENSTEDT, RM
    JAHNKE, KD
    KEMMERLING, C
    GURTLER, H
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (02): : 265 - 269
  • [33] MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    Tamura, Koichiro
    Peterson, Daniel
    Peterson, Nicholas
    Stecher, Glen
    Nei, Masatoshi
    Kumar, Sudhir
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (10) : 2731 - 2739
  • [34] CLUSTAL-W - IMPROVING THE SENSITIVITY OF PROGRESSIVE MULTIPLE SEQUENCE ALIGNMENT THROUGH SEQUENCE WEIGHTING, POSITION-SPECIFIC GAP PENALTIES AND WEIGHT MATRIX CHOICE
    THOMPSON, JD
    HIGGINS, DG
    GIBSON, TJ
    [J]. NUCLEIC ACIDS RESEARCH, 1994, 22 (22) : 4673 - 4680
  • [35] Waksman S. A., 1961, THE ACTINOMYCETES CL, V2
  • [36] REPORT OF THE AD-HOC-COMMITTEE ON RECONCILIATION OF APPROACHES TO BACTERIAL SYSTEMATICS
    WAYNE, LG
    BRENNER, DJ
    COLWELL, RR
    GRIMONT, PAD
    KANDLER, O
    KRICHEVSKY, MI
    MOORE, LH
    MOORE, WEC
    MURRAY, RGE
    STACKEBRANDT, E
    STARR, MP
    TRUPER, HG
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1987, 37 (04): : 463 - 464
  • [37] Williams S.T., 1989, Bergey's Manual of Determinative Bacteriology, V4, P2453, DOI DOI 10.5555/19932293969
  • [38] Saccharothrix yanglingensis sp nov., an antagonistic endophytic actinomycete isolated from cucumber plant
    Yan, Xia
    Huang, Li-Li
    Tu, Xuan
    Gao, Xiao-Ning
    Kang, Zhen-Sheng
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2012, 101 (01): : 141 - 146
  • [39] LENTZEA GEN-NOV, A NEW GENUS OF THE ORDER ACTINOMYCETALES
    YASSIN, AF
    RAINEY, FA
    BRZEZINKA, H
    JAHNKE, KD
    WEISSBRODT, H
    BUDZIKIEWICZ, H
    STACKEBRANDT, E
    SCHAAL, KP
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1995, 45 (02): : 357 - 363