Genome-Wide Identification of the Invertase Gene Family in Populus

被引:59
作者
Chen, Zhong [1 ,2 ]
Gao, Kai [1 ,2 ]
Su, Xiaoxing [3 ]
Rao, Pian [1 ,2 ]
An, Xinmin [1 ,2 ]
机构
[1] Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Natl Engn Lab Tree Breeding, Beijing, Peoples R China
[2] Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Minist Educ, Key Lab Genet & Breeding Forest Trees & Ornamenta, Beijing, Peoples R China
[3] Beijing Berry Genom Co Ltd, Beijing, Peoples R China
基金
中国国家自然科学基金; 国家高技术研究发展计划(863计划);
关键词
BETA-FRUCTOSIDASE; DIFFERENTIAL EXPRESSION; SUCROSE; POPLAR; ACCUMULATION; ARABIDOPSIS; EVOLUTION; PLANTS; GROWTH; FRUCTOFURANOSIDASE;
D O I
10.1371/journal.pone.0138540
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5), 3 vacuolar invertase genes (PtVINV1-3) and 16 neutral/alkaline invertase genes (PtNINV1-16) were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials.
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页数:21
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共 57 条
[51]   Divergence of the Dof gene families in poplar, Arabidopsis, and rice suggests multiple modes of gene evolution after duplication [J].
Yang, Xiaohan ;
Tuskan, Gerald A. ;
Cheng, Zong-Ming .
PLANT PHYSIOLOGY, 2006, 142 (03) :820-830
[52]   Patterns of enzyme activities and gene expressions in sucrose metabolism in relation to sugar accumulation and composition in the aril of Litchi chinensis Sonn. [J].
Yang, Zhuanying ;
Wang, Tengduan ;
Wang, Huicong ;
Huang, Xuming ;
Qin, Yonghua ;
Hu, Guibing .
JOURNAL OF PLANT PHYSIOLOGY, 2013, 170 (08) :731-740
[53]   PAML 4: Phylogenetic analysis by maximum likelihood [J].
Yang, Ziheng .
MOLECULAR BIOLOGY AND EVOLUTION, 2007, 24 (08) :1586-1591
[54]   Genome-Wide Identification, Expression, and Activity Analysis of Alkaline/Neutral Invertase Gene Family from Cassava (Manihot esculenta Crantz) [J].
Yao, Yuan ;
Geng, Meng-Ting ;
Wu, Xiao-Hui ;
Liu, Jiao ;
Li, Rui-Mei ;
Hu, Xin-Wen ;
Guo, Jian-Chun .
PLANT MOLECULAR BIOLOGY REPORTER, 2015, 33 (02) :304-315
[55]   Study of seed hair growth in Populus tomentosa, an important character of female floral bud development [J].
Ye, Meixia ;
Chen, Zhong ;
Su, Xiaoxing ;
Ji, Lexiang ;
Wang, Jia ;
Liao, Weihua ;
Ma, Huandi ;
An, Xinmin .
BMC GENOMICS, 2014, 15
[56]   The role of sucrose-metabolizing enzymes in pear fruit that differ in sucrose accumulation [J].
Zhang, Hu Ping ;
Wu, Ju You ;
Qin, Gai Hua ;
Yao, Gai Fang ;
Qi, Kai Jie ;
Wang, Li Fen ;
Zhang, Shao Ling .
ACTA PHYSIOLOGIAE PLANTARUM, 2014, 36 (01) :71-77
[57]   Genome-wide identification, classification, and expression analysis of CDPK and its closely related gene families in poplar (Populus trichocarpa) [J].
Zuo, Ran ;
Hu, Ruibo ;
Chai, Guohua ;
Xu, Meiling ;
Qi, Guang ;
Kong, Yingzhen ;
Zhou, Gongke .
MOLECULAR BIOLOGY REPORTS, 2013, 40 (03) :2645-2662