The Utilization of Competing Unfolding Pathways of Monellin Is Dictated by Enthalpic Barriers

被引:14
作者
Aghera, Nilesh [1 ]
Udgaonkar, Jayant B. [1 ]
机构
[1] Tata Inst Fundamental Res, Natl Ctr Biol Sci, Bangalore 560065, Karnataka, India
关键词
STRUCTURE-REACTIVITY RELATIONSHIPS; FOLDING INTERMEDIATE ENSEMBLE; RATE-LIMITING STEP; TRANSITION-STATE; THERMODYNAMIC CHARACTERIZATION; MULTIPLE PATHWAYS; ENERGY LANDSCAPE; STRUCTURAL HETEROGENEITY; GUANIDINE-HYDROCHLORIDE; KINETIC INTERMEDIATE;
D O I
10.1021/bi400688w
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Direct evidence of the presence of competing pathways for the folding or unfolding reactions of proteins is difficult to obtain. A direct signature for multiple pathways, seen so far only rarely in folding or unfolding studies, is an upward curvature in the dependence of the logarithm of the observed rate constant (lambda(u)) of folding on denaturant concentration. In this study, the unfolding mechanism of the wild-type (wt) and E24A variants of monellin has been investigated, and both variants are shown to display upward curvatures in plots of log lambda(u) versus denaturant concentration. Curvature is distinctly more pronounced for E24A than for the wt protein. Kinetic unfolding studies of E24A were conducted over a range of denaturant concentrations and across a range of temperatures, and the kinetic data were globally analyzed assuming two parallel pathways L and H, which proceed through transition states TSL and TSH, respectively. The observation of the upward curvature in the unfolding kinetics permitted a thermodynamic analysis of how unfolding switches from one pathway to the other upon a change in unfolding conditions. The m(double dagger-N) and Delta C-p(double dagger) values indicate that TSL is more compact than TSH. The major contribution to the free energy of activation on either pathway is seen to be enthalpic and not entropic in origin.
引用
收藏
页码:5770 / 5779
页数:10
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