Engineering the Pattern of Protein Glycosylation Modulates the Thermostability of a GH11 Xylanase

被引:69
作者
Fonseca-Maldonado, Raquel [1 ]
Vieira, Davi Serradella [2 ]
Alponti, Juliana Sanchez [2 ]
Bonneil, Eric [3 ]
Thibault, Pierre [3 ]
Ward, Richard John [2 ,4 ]
机构
[1] Univ Sao Paulo, Fac Med Ribeirao Preto, Dept Bioquim & Imunol, BR-14049900 Sao Paulo, Brazil
[2] Univ Sao Paulo, Fac Filosofia Ciencias & Letras Ribeirao Preto, Dept Quim, BR-14049901 Sao Paulo, Brazil
[3] Univ Montreal, Inst Res Immunol & Canc, Montreal, PQ, Canada
[4] Ctr Nacl Pesquisa Energia & Mat, Lab Nacl Ciencia & Tecnol Bioetanol, BR-13083970 Campinas, SP, Brazil
基金
巴西圣保罗研究基金会;
关键词
N-LINKED GLYCOSYLATION; ENDOPLASMIC-RETICULUM; PICHIA-PASTORIS; QUALITY-CONTROL; GLYCANS; SIMULATION; EXPRESSION; STABILITY; EFFICIENT; DYNAMICS;
D O I
10.1074/jbc.M113.485953
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein glycosylation is a common post-translational modification, the effect of which on protein conformational and stability is incompletely understood. Here we have investigated the effects of glycosylation on the thermostability of Bacillus subtilis xylanase A(XynA) expressed in Pichia pastoris. Intact mass analysis of the heterologous wild-type XynA revealed two, three, or four Hex(8-16)GlcNAc(2) modifications involving asparagine residues at positions 20, 25, 141, and 181. Molecular dynamics (MD) simulations of the XynA modified with various combinations of branched Hex(9)GlcNAc(2) at these positions indicated a significant contribution from protein-glycan interactions to the overall energy of the glycoproteins. The effect of glycan content and glycosylation position on protein stability was evaluated by combinatorial mutagenesis of all six potential N-glycosylation sites. The majority of glycosylated enzymes expressed in P. pastoris presented increased thermostability in comparison with their unglycosylated counterparts expressed in Escherichia coli. Steric effects of multiple glycosylation events were apparent, and glycosylation position rather than the number of glycosylation events determined increases in thermostability. The MD simulations also indicated that clustered glycan chains tended to favor less stabilizing glycan-glycan interactions, whereas more dispersed glycosylation patterns favored stabilizing protein-glycan interactions.
引用
收藏
页码:25522 / 25534
页数:13
相关论文
共 50 条
[1]  
[Anonymous], 1996, Biomolecular Simulation: the GROMOS96 Manual and User Guide
[2]   On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database [J].
Apweiler, R ;
Hermjakob, H ;
Sharon, N .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1999, 1473 (01) :4-8
[3]  
Arfken G., 1985, Mathematical methods for physicists, P428, DOI DOI 10.1016/B978-0-12-059820-5.50015-X
[4]  
Berendsen HJC, 1981, INTERMOLECULAR FORCE, V11, P331, DOI DOI 10.1111/J.1574-695X.1996.TB00128.X
[5]   GlyProt:: in silico glycosylation of proteins [J].
Bohne-Lang, A ;
von der Lieth, CW .
NUCLEIC ACIDS RESEARCH, 2005, 33 :W214-W219
[6]  
Bretthauer RK, 1999, BIOTECHNOL APPL BIOC, V30, P193
[7]   The dolichol pathway of N-linked glycosylation [J].
Burda, P ;
Aebi, M .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1999, 1426 (02) :239-257
[8]   Glycosylation Enhances Peptide Hydrophobic Collapse by Impairing Solvation [J].
Cheng, Shanmei ;
Edwards, Scott A. ;
Jiang, Yindi ;
Graeter, Frauke .
CHEMPHYSCHEM, 2010, 11 (11) :2367-2374
[9]   Expression of heterologous proteins in Pichia pastoris:: a useful experimental tool in protein engineering and production [J].
Daly, R ;
Hearn, MTW .
JOURNAL OF MOLECULAR RECOGNITION, 2005, 18 (02) :119-138
[10]   PARTICLE MESH EWALD - AN N.LOG(N) METHOD FOR EWALD SUMS IN LARGE SYSTEMS [J].
DARDEN, T ;
YORK, D ;
PEDERSEN, L .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (12) :10089-10092