Oleiharenicola alkalitolerans gen. nov., sp nov., a new member of the phylum Verrucomicrobia isolated from an oilsands tailings pond

被引:6
作者
Rochman, Fauziah F. [1 ]
Kim, Joong-Jae [1 ]
Rijpstra, W. Irene C. [2 ]
Damste, Jaap S. Sinninghe [2 ,3 ]
Schumann, Peter [4 ]
Verbeke, Tobin J. [1 ]
Dunfield, Peter F. [1 ]
机构
[1] Univ Calgary, Dept Biol Sci, Calgary, AB, Canada
[2] Univ Utrecht, Dept Marine Microbiol & Biogeochem, NIOZ Royal Netherlands Inst Sea Res, POB 59, NL-1790 AB Den Burg, Texel, Netherlands
[3] Univ Utrecht, Dept Earth Sci, Fac Geosci, POB 80-021, NL-3508 TA Utrecht, Netherlands
[4] Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany
基金
加拿大自然科学与工程研究理事会; 欧洲研究理事会;
关键词
oilsands tailings ponds; alkalitolerant bacterium; Verrucomicrobia; Opitutaceae; Oleiharenicola alkalitolerans; SEQUENCE ALIGNMENT; BACTERIA; DIVERSITY; DIVISION; DATABASE; SEAWATER; ACID;
D O I
10.1099/ijsem.0.002624
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel member of the phylum Verrucomicrobia was isolated from an oilsands tailings pond in Alberta, Canada. Cells of isolate NVTT are Gram-negative, strictly aerobic, non-pigmented, non-motile cocci to diplococci 0.5-1.0 mu m in diameter. The bacterium is neutrophilic (optimum pH 6.0-8.0) but alkalitolerant, capable of growth between pH 5.5 and 11.0. The temperature range for growth is 15-40 degrees C (optimum 25-37 degrees C). Carbon and energy sources include sugars and organic acids. Nitrogen sources include nitrate, urea, L-glycine, L-alanine, L-proline and L-serine. Does not fix atmospheric nitrogen. Does not require NaCl and is inhibited at NaCl concentrations above 3.0% (w/v). The DNA G+Ccontent of strain NVTT, based on a draft genome sequence, is 66.1mol%. MK-6 and MK-7 are the major respiratory quinones. Major cellular fatty acids are anteiso-C-15:0 and iso-C-15:0. Phylogenetic analysis of 16S rRNA gene sequences revealed that the strain belongs to the family Opitutaceae of the phylum Verrucomicrobia. The most closely related validated species is Opitutus terrae (93.7% 16S rRNA gene sequence identity to its type strain PB90-1(T)). Based on genotypic, phenotypic and chemotaxonomic characteristics, it was concluded that this strain represents a novel genus and species, for which the name Oleiharenicola alkalitolerans gen. nov., sp. nov. is proposed. The type strain of this novel species is NVTT (=ATCC BAA-2697(T);=DSM 29249(T)).
引用
收藏
页码:1078 / 1084
页数:7
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