Genetic signatures of a demographic collapse in a large-bodied forest dwelling primate (Mandrillus leucophaeus)

被引:14
作者
Ting, Nelson [1 ]
Astaras, Christos [2 ]
Hearn, Gail [3 ,4 ]
Honarvar, Shaya [3 ,4 ]
Corush, Joel [1 ]
Burrell, Andrew S. [5 ]
Phillips, Naomi [6 ]
Morgan, Bethan J. [7 ,8 ]
Gadsby, Elizabeth L. [9 ]
Raaum, Ryan [10 ,11 ]
Roos, Christian [12 ]
机构
[1] Univ Oregon, Dept Anthropol, Eugene, OR 97403 USA
[2] Univ Oxford, Wildlife Conservat Res Unit, Tubney OX13 5QL, Oxon, England
[3] Drexel Univ, Dept Biol, Philadelphia, PA 19104 USA
[4] Drexel Univ, Bioko Biodivers Protect Program, Philadelphia, PA 19104 USA
[5] NYU, Dept Anthropol, New York, NY 10003 USA
[6] Arcadia Univ, Dept Biol, Glenside, PA 19038 USA
[7] San Diego Zoo Global Inst Conservat Res, Escondido, CA 92027 USA
[8] Univ Stirling, Dept Psychol, Stirling FK9 4LA, Scotland
[9] Pandrillus, HEPO, Calabar, Nigeria
[10] CUNY, Grad Ctr, W Bronx, NY 10468 USA
[11] CUNY Herbert H Lehman Coll, Dept Anthropol, W Bronx, NY 10468 USA
[12] German Primate Ctr, Gene Bank Primates & Primate Genet Lab, D-37077 Gottingen, Germany
基金
美国国家科学基金会;
关键词
Bayesian Skyline Plot; bottleneck; climate change; Cross-Sanaga-Bioko forests; drill; Mandrillus; HISTORIC CLIMATIC EVENTS; POPULATION-DYNAMICS; MITOCHONDRIAL-DNA; BABOONS PAPIO; DIVERGENCE DATES; AFRICAN FORESTS; MODEL; SELECTION; SPHINX; DIVERSITY;
D O I
10.1002/ece3.98
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
It is difficult to predict how current climate change will affect wildlife species adapted to a tropical rainforest environment. Understanding how population dynamics fluctuated in such species throughout periods of past climatic change can provide insight into this issue. The drill (Mandrillus leucophaeus) is a large-bodied rainforest adapted mammal found in West Central Africa. In the middle of this endangered monkey's geographic range is Lake Barombi Mbo, which has a well-documented palynological record of environmental change that dates to the Late Pleistocene. We used a Bayesian coalescent-based framework to analyze 2,076 base pairs of mitochondrial DNA across wild drill populations to infer past changes in female effective population size since the Late Pleistocene. Our results suggest that the drill underwent a nearly 15-fold demographic collapse in female effective population size that was most prominent during the Mid Holocene (approximately 3-5 Ka). This time period coincides with a period of increased dryness and seasonality across Africa and a dramatic reduction in forest coverage at Lake Barombi Mbo. We believe that these changes in climate and forest coverage were the driving forces behind the drill population decline. Furthermore, the warm temperatures and increased aridity of the Mid Holocene are potentially analogous to current and future conditions faced by many tropical rainforest communities. In order to prevent future declines in population size in rainforest-adapted species such as the drill, large tracts of forest should be protected to both preserve habitat and prevent forest loss through aridification.
引用
收藏
页码:550 / 561
页数:12
相关论文
共 82 条
[21]  
Drummond AJ, 2005, MOL BIOL EVOL, V22, P1185, DOI [10.1093/molbev/msi103, 10.1093/molbev/mss075]
[22]   BEAST: Bayesian evolutionary analysis by sampling trees [J].
Drummond, Alexei J. ;
Rambaut, Andrew .
BMC EVOLUTIONARY BIOLOGY, 2007, 7 (1)
[23]   Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows [J].
Excoffier, Laurent ;
Lischer, Heidi E. L. .
MOLECULAR ECOLOGY RESOURCES, 2010, 10 (03) :564-567
[24]   Population dynamics of American horseshoe crabs-historic climatic events and recent anthropogenic pressures [J].
Faurby, Soren ;
King, Tim L. ;
Obst, Matthias ;
Hallerman, Eric M. ;
Pertoldi, Cino ;
Funch, Peter .
MOLECULAR ECOLOGY, 2010, 19 (15) :3088-3100
[25]  
Fu YX, 1997, GENETICS, V147, P915
[26]   WHEN COLD IS BETTER: CLIMATE-DRIVEN ELEVATION SHIFTS YIELD COMPLEX PATTERNS OF DIVERSIFICATION AND DEMOGRAPHY IN AN ALPINE SPECIALIST (AMERICAN PIKA, OCHOTONA PRINCEPS) [J].
Galbreath, Kurt E. ;
Hafner, David J. ;
Zamudio, Kelly R. .
EVOLUTION, 2009, 63 (11) :2848-2863
[27]   Genetic signature of anthropogenic population collapse in orang-utans [J].
Goossens, B ;
Chikhi, L ;
Ancrenaz, M ;
Lackman-Ancrenaz, I ;
Andau, P ;
Bruford, MW .
PLOS BIOLOGY, 2006, 4 (02) :285-291
[28]   Pleistocene evolutionary history of the Clouded Apollo (Parnassius mnemosyne):: genetic signatures of climate cycles and a 'time-dependent' mitochondrial substitution rate [J].
Gratton, P. ;
Konopinski, M. K. ;
Sbordoni, V. .
MOLECULAR ECOLOGY, 2008, 17 (19) :4248-4262
[29]  
Haffer J., 1982, P6
[30]  
HANKE M, 1994, BIOTECHNIQUES, V17, P858