STRIPE TO SPOT TRANSITION IN A PLANT ROOT HAIR INITIATION MODEL

被引:14
作者
Brena-Medina, V. F. [1 ]
Avitabile, D. [2 ]
Champneys, A. R. [3 ]
Ward, M. J. [4 ]
机构
[1] Univ Nacl Autonoma Mexico, Ctr Ciencias Matemat, Morelia 58190, Michoacan, Mexico
[2] Univ Nottingham, Sch Math Sci, Nottingham N67 2RD, England
[3] Univ Bristol, Engn Math, Bristol BS8 1TR, Avon, England
[4] Univ British Columbia, Dept Math, Vancouver, BC V6T 1Z2, Canada
基金
英国工程与自然科学研究理事会; 加拿大自然科学与工程研究理事会;
关键词
reaction-diffusion systems; nonlocal eigenvalue problems; bifurcation analysis; nonhomogeneous systems; localized solutions; plant root hair initiation modeling; GIERER-MEINHARDT MODEL; GRAY-SCOTT MODEL; BIOLOGICAL PATTERN-FORMATION; SWIFT-HOHENBERG EQUATION; AUXIN TRANSPORT; SPIKE SOLUTIONS; DYNAMICS; INSTABILITIES; STABILITY; SNAKING;
D O I
10.1137/140964527
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
A generalized Schnakenberg reaction-diffusion system with source and loss terms and a spatially dependent coefficient of the nonlinear term is studied both numerically and analytically in two spatial dimensions. The system has been proposed as a model of hair initiation in the epidermal cells of plant roots. Specifically the model captures the kinetics of a small G-protein ROP, which can occur in active and inactive forms, and whose activation is believed to be mediated by a gradient of the plant hormone auxin. Here the model is made more realistic with the inclusion of a transverse coordinate. Localized stripe-like solutions of active ROP occur for high enough total auxin concentration and lie on a complex bifurcation diagram of single- and multipulse solutions. Transverse stability computations, confirmed by numerical simulation show that, apart from a boundary stripe, these one-dimensional (1D) solutions typically undergo a transverse instability into spots. The spots so formed typically drift and undergo secondary instabilities such as spot replication. A novel two-dimensional (2D) numerical continuation analysis is performed that shows that the various stable hybrid spot-like states can coexist. The parameter values studied lead to a natural, singularly perturbed, so-called semistrong interaction regime. This scaling enables an analytical explanation of the initial instability by describing the dispersion relation of a certain nonlocal eigenvalue problem. The analytical results are found to agree favorably with the numerics. Possible biological implications of the results are discussed.
引用
收藏
页码:1090 / 1119
页数:30
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