A Novel L-Xylulose Reductase Essential for L-Arabinose Catabolism in Trichoderma reesei

被引:17
作者
Metz, Benjamin [1 ]
Mojzita, Dominik [2 ]
Herold, Silvia [1 ]
Kubicek, Christian P. [1 ]
Richard, Peter [2 ]
Seiboth, Bernhard [1 ]
机构
[1] Vienna Univ Technol, Res Div Biotechnol & Microbiol, Inst Chem Engn, A-1060 Vienna, Austria
[2] VTT Tech Res Ctr Finland, Espoo, Finland
基金
奥地利科学基金会; 芬兰科学院;
关键词
L-ARABINITOL; 4-DEHYDROGENASE; D-GALACTOSE CATABOLISM; D-XYLOSE; HYPOCREA-JECORINA; ASPERGILLUS-NIGER; DEGRADING ENZYMES; MISSING LINK; IDENTIFICATION; METABOLISM; PATHWAY;
D O I
10.1021/bi301583u
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
L-Xylulose reductases belong to the superfamily of short chain dehydrogenases and reductases (SDRs) and catalyze the NAD(P)H-dependent reduction of L-xylulose to xylitol in L-arabinose and glucuronic acid catabolism. Here we report the identification of a novel L-xylulose reductase LXR3 in the fungus Trichoderma reesei by a bioinformatic approach in combination with a functional analysis. LXR3, a 31 kDa protein, catalyzes the reduction of L-xylulose to xylitol via NADPH and is also able to convert D-xylulose, D-ribulose, L-sorbose, and D-fructose to their corresponding polyols. Transcription of lxr3 is specifically induced by L-arabinose and L-arabitol. Deletion of lxr3 affects growth on L-arabinose and L-arabitol and reduces total NADPH-dependent LXR activity in cell free extracts. A phylogenetic analysis of known L-xylulose reductases shows that LXR3 is phylogenetically different from the Aspergillus niger L-xylulose reductase LxrA and, moreover, that all identified true L-xylulose reductases belong to different clades within the superfamily of SDRs. This indicates that the enzymes responsible for the reduction of L-xylulose in L-arabinose and glucuronic acid catabolic pathways have evolved independently and that even the fungal LXRs of the L-arabinose catabolic pathway have evolved in different clades of the superfamily of SDRs.
引用
收藏
页码:2453 / 2460
页数:8
相关论文
共 35 条
[1]   Molecular Regulation of Arabinan and L-Arabinose Metabolism in Hypocrea jecorina (Trichoderma reesei) [J].
Akel, Eda ;
Metz, Benjamin ;
Seiboth, Bernhard ;
Kubicek, Christian P. .
EUKARYOTIC CELL, 2009, 8 (12) :1837-1844
[2]   L-ARABINOSE METABOLISM BY CELL-FREE EXTRACTS OF PENICILLIUM CHRYSOGENUM [J].
CHIANG, C ;
KNIGHT, SG .
BIOCHIMICA ET BIOPHYSICA ACTA, 1961, 46 (02) :271-&
[3]  
CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1016/0003-2697(87)90021-2
[4]   The Biochemistry and Structural Biology of Plant Cell Wall Deconstruction [J].
Gilbert, Harry J. .
PLANT PHYSIOLOGY, 2010, 153 (02) :444-455
[5]   THE DEVELOPMENT OF A HETEROLOGOUS TRANSFORMATION SYSTEM FOR THE CELLULOLYTIC FUNGUS TRICHODERMA-REESEI BASED ON A PYRG-NEGATIVE MUTANT STRAIN [J].
GRUBER, F ;
VISSER, J ;
KUBICEK, CP ;
DEGRAAFF, LH .
CURRENT GENETICS, 1990, 18 (01) :71-76
[6]   Gene targeting in a nonhomologous end joining deficient Hypocrea jecorina [J].
Guangtao, Zhang ;
Hartl, Lukas ;
Schuster, Andre ;
Polak, Stefan ;
Schmoll, Monika ;
Wang, Tianhong ;
Seidl, Verena ;
Seiboth, Bernhard .
JOURNAL OF BIOTECHNOLOGY, 2009, 139 (02) :146-151
[7]   Metabolic engineering for pentose utilization in Saccharomyces cerevisiae [J].
Hahn-Haegerdal, Bdrbel ;
Karhumaa, Kaisa ;
Jeppsson, Marie ;
Gorwa-Grauslund, Marie F. .
BIOFUELS, 2007, 108 :147-177
[8]   Short-chain dehydrogenases/reductases (SDRs) -: Coenzyme-based functional assignments in completed genomes [J].
Kallberg, Y ;
Oppermann, U ;
Jörnvall, H ;
Persson, B .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2002, 269 (18) :4409-4417
[9]   Deletion and allelic exchange of the Aspergillus fumigatus veA locus via a novel recyclable marker module [J].
Krappmann, S ;
Bayram, Ö ;
Braus, GH .
EUKARYOTIC CELL, 2005, 4 (07) :1298-1307
[10]   MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences [J].
Kumar, Sudhir ;
Nei, Masatoshi ;
Dudley, Joel ;
Tamura, Koichiro .
BRIEFINGS IN BIOINFORMATICS, 2008, 9 (04) :299-306