FTIR spectra of algal species can be used as physiological fingerprints to assess their actual growth potential

被引:53
作者
Jebsen, Christian [1 ]
Norici, Alessandra [2 ]
Wagner, Heiko [1 ]
Palmucci, Matteo [2 ]
Giordano, Mario [2 ]
Wilhelm, Christian [1 ]
机构
[1] Univ Leipzig, Inst Biol Plant Physiol, Leipzig, Germany
[2] Univ Politecn Marche, Dipartimento Sci Vita & Ambiente, Ancona, Italy
关键词
TRANSFORM INFRARED-SPECTROSCOPY; LEAST-SQUARES REGRESSION; C-N-P; CARBON ALLOCATION; BIOMASS COMPOSITION; LIGHT-INTENSITY; PHYTOPLANKTON; MICROALGAE; WATER; TOOL;
D O I
10.1111/j.1399-3054.2012.01636.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Fourier transform infrared (FTIR) spectra were measured from cells of Microcystis aeruginosa and Protoceratium reticulatum, whose growth rates were manipulated by the availability of nutrients or light. As expected, the macromolecular composition changed in response to the treatments. These changes were species-specific and depended on the type of perturbation applied to the growth regime. Microcystis aeruginosa showed an increase in the carbohydrate-to-protein ratio with decreased growth rates, under nutrient limitation, whereas light limitation induced a decrease of the carbohydrate-to-protein ratio with decreasing proliferation rates. The macromolecular pools of P. reticulatum showed a higher degree of compositional homeostasis. Only when the lowest light irradiance and nutrient availability were supplied, an increase of the carbohydrate-to-protein FTIR absorbance ratio was observed. A species-specific partial least squares (PLS) model was developed using the whole FTIR spectra. This model afforded a very high correlation between the predicted and the measured growth rates, regardless of the growth conditions. On the contrary, the prediction based on absorption band ratios generally used in FTIR studies would strongly depend on growth conditions. This new computational method could constitute a substantial improvement in the early warning systems of algal blooms and, in general, for the study of algal growth, e.g. in biotechnology. Furthermore, these results confirm the suitability of FTIR spectroscopy as a tool to map complex biological processes like growth under different environmental conditions.
引用
收藏
页码:427 / 438
页数:12
相关论文
共 53 条
[1]   STANDARD NORMAL VARIATE TRANSFORMATION AND DE-TRENDING OF NEAR-INFRARED DIFFUSE REFLECTANCE SPECTRA [J].
BARNES, RJ ;
DHANOA, MS ;
LISTER, SJ .
APPLIED SPECTROSCOPY, 1989, 43 (05) :772-777
[2]   Infrared spectroscopy of proteins [J].
Barth, Andreas .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2007, 1767 (09) :1073-1101
[3]   Approaches for determining phytoplankton nutrient limitation [J].
Beardall, J ;
Young, E ;
Roberts, S .
AQUATIC SCIENCES, 2001, 63 (01) :44-69
[4]   A comparison of methods for detection of phosphate limitation in microalgae [J].
Beardall, J ;
Berman, T ;
Heraud, P ;
Kadiri, MO ;
Light, BR ;
Patterson, G ;
Roberts, S ;
Sulzberger, B ;
Sahan, E ;
Uehlinger, U ;
Wood, B .
AQUATIC SCIENCES, 2001, 63 (01) :107-121
[5]   Evolution of an artificial seawater medium: Improvements in enriched seawater, artificial water over the last two decades [J].
Berges, JA ;
Franklin, DJ ;
Harrison, PJ .
JOURNAL OF PHYCOLOGY, 2001, 37 (06) :1138-1145
[6]   Performance of some variable selection methods when multicollinearity is present [J].
Chong, IG ;
Jun, CH .
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2005, 78 (1-2) :103-112
[7]   ADAPTATIONS IN GROWTH AND DIVISION IN EUGLENA EFFECTED BY ENERGY SUPPLY [J].
COOK, JR .
JOURNAL OF PROTOZOOLOGY, 1963, 10 (04) :436-&
[8]   Using FTIR spectroscopy for rapid determination of lipid accumulation in response to nitrogen limitation in freshwater microalgae [J].
Dean, Andrew P. ;
Sigee, David C. ;
Estrada, Beatriz ;
Pittman, Jon K. .
BIORESOURCE TECHNOLOGY, 2010, 101 (12) :4499-4507
[9]   Impact of phosphorus quota and growth phase on carbon allocation in Chlamydomonas reinhardtii: an FTIR microspectroscopy study [J].
Dean, Andrew P. ;
Nicholson, James M. ;
Sigee, David C. .
EUROPEAN JOURNAL OF PHYCOLOGY, 2008, 43 (04) :345-354
[10]   FOURIER TRANSFORM INFRARED SPECTROSCOPY OF MICROALGAE AS A NOVEL TOOL FOR BIODIVERSITY STUDIES, SPECIES IDENTIFICATION, AND THE ASSESSMENT OF WATER QUALITY [J].
Domenighini, Alberto ;
Giordano, Mario .
JOURNAL OF PHYCOLOGY, 2009, 45 (02) :522-531