Phylogenetics of the mycoheterotrophic genus Thismia (Thismiaceae: Dioscoreales) with a focus on the Old World taxa: delineation of novel natural groups and insights into the evolution of morphological traits

被引:39
作者
Shepeleva, Ekaterina A. [1 ]
Schelkunov, Mikhail, I [2 ,3 ]
Hrones, Michal [4 ]
Sochor, Michal [5 ]
Dancak, Martin [4 ]
Merckx, Vincent S. F. T. [6 ]
Kikuchi, Izai A. B. S. [6 ,7 ]
Chantanaorrapint, Sahut [8 ]
Suetsugu, Kenji [9 ]
Tsukaya, Hirokazu [10 ]
Mar, Shek S. [11 ]
Luu, Hong Truong [12 ,13 ]
Li, Hong-Qing [14 ]
Logacheva, Maria D. [1 ,2 ,3 ]
Nuraliev, Maxim S. [1 ,15 ]
机构
[1] Moscow MV Lomonosov State Univ, Moscow 119234, Russia
[2] Skolkovo Inst Sci & Technol, Moscow 143025, Russia
[3] Inst Informat Transmiss Problems, Moscow 101447, Russia
[4] Palacky Univ, Fac Sci, CZ-77146 Olomouc, Czech Republic
[5] Crop Res Inst, Ctr Reg Hana Biotechnol & Agr Res, Slechtitelu 29, CZ-78371 Olomouc, Czech Republic
[6] Nat Biodivers Ctr, POB 9517, NL-2300 RA Leiden, Netherlands
[7] Leiden Univ, Hortus Bot, 5e Binnenvestgracht 8, NL-2311 VH Leiden, Netherlands
[8] Prince Songkla Univ, Fac Sci, Dept Biol, Hat Yai 90112, Songkhla, Thailand
[9] Kobe Univ, Grad Sch Sci, Dept Biol, Nada Ku, 1-1 Rokkodai, Kobe, Hyogo 6578501, Japan
[10] Univ Tokyo, Grad Sch Sci, Dept Biol Sci, Bunkyo Ku, 7-3-1 Hongo, Tokyo 130033, Japan
[11] Ying Wa Coll, Hong Kong, Peoples R China
[12] Vietnam Acad Sci & Technol, Southern Inst Ecol, Thanh Loc Ward, 1A,TL29 St,Dist 12, Ho Chi Minh City, Vietnam
[13] Vietnam Acad Sci & Technol, Grad Univ Sci & Technol, Thanh Loc Ward, 1A,TL29 St,Dist 12, Ho Chi Minh City, Vietnam
[14] East China Normal Univ, Sch Life Sci, 500 Dongchuan Rd, Shanghai 200241, Peoples R China
[15] Joint Russian Vietnamese Trop Sci & Technol Ctr, Hanoi, Vietnam
基金
俄罗斯基础研究基金会;
关键词
floral traits; high-throughput sequencing; molecular phylogenetics; monocots; non-photosynthetic plants; South-East Asia; PLANTS; INFERENCE; NUCLEAR; CHOICE; BIAS; DNA;
D O I
10.1093/botlinnean/boaa017
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Thismia is a genus of > 80 mycoheterotrophic species characterized by a peculiar appearance and complex floral morphology. A significant proportion of the species and morphological diversity of Thismia has only been uncovered in the past two decades, and new discoveries continue to be made. Given that many new data have recently become available, and the most comprehensive taxonomic revision of the genus from 1938 addresses less than half of the currently known species, previous hypotheses for species relationships and infrageneric taxonomic classification in Thismia was in need of review. Extensive molecular phylogenetic studies of Thismia at the genus level have never been presented. We investigate the phylogenetic relationships of 41 species (and one variety) of Thismia from the Old World. Our study comprises 68 specimens (for 28 of which the data were newly generated), including outgroup taxa broadly representing Thismiaceae (= Burmanniaceae p.p. sensu APG IV, 2016), and is based on two nuclear and one mitochondrial marker. We use maximum likelihood and Bayesian inference to infer relationships amongthe taxa. We also constructed a morphological dataset of 12 mostly floral characters, comparing these characters to hypotheses based on molecular evidence to identify putative synapomorphies for major Glades and to discuss hypotheses regarding the evolution of structural traits in the genus. Our analyses indicate that the majority of currently accepted infrageneric taxa of Thismia are polyphyletic. We find support for the monophyly of the Old World group, in which we recognize five well-supported lineages (clades); the only New World species studied appears to be related to the Neotropical genus Tiputinia. Ancestral state reconstructions demonstrate that the evolution of most morphological characters was homoplastic, but we identify characters that provide each of the five clades of Old World Thismia with a unique morphological description. The geographical distribution of the species under study is also shown to be consistent with the major Glades. Our investigation provides a phylogenetic basis for the development of a novel sectional classification of Thismia reflecting morphological and geographical traits.
引用
收藏
页码:287 / 315
页数:29
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