A linear mixed model approach to compare the evolution of multiple biological rhythms

被引:8
作者
Fontana, Andrea [1 ]
Copetti, Massimiliano [1 ]
Mazzoccoli, Gianluigi [2 ,3 ]
Kypraios, Theodore [4 ]
Pellegrini, Fabio [1 ,5 ]
机构
[1] IRCCS Casa Sollievo Sofferenza, Biostat Unit, I-71013 San Giovanni Rotondo, FG, Italy
[2] IRCCS Casa Sollievo Sofferenza, Dept Med Sci, Div Internal Med, I-71013 San Giovanni Rotondo, FG, Italy
[3] IRCCS Casa Sollievo Sofferenza, Chronobiol Unit, I-71013 San Giovanni Rotondo, FG, Italy
[4] Univ Nottingham, Sch Math Sci, Nottingham NG7 2RD, England
[5] Ist Ric Farmacol Mario Negri, Consorzio Mario Negri Sud, DPCE, Biostat Unit, I-66030 Santa Maria Imbaro, CH, Italy
关键词
chronobiology; multivariate linear mixed model; multiple biorhythms; cosinor analysis; longitudinal data; CIRCADIAN-RHYTHMS; METAANALYSIS; CHRONODISRUPTION; PATTERNS; OUTCOMES;
D O I
10.1002/sim.5712
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The assessment and comparison of multiple biological rhythms represent an important challenge in chronobiology. They allow the investigation of whether a well-defined time-qualified relationship between biorhythms of the same frequency range is maintained in the presence of functional alterations, which may lead to chronodisruption or internal desynchronization. We propose a multivariate linear mixed model approach where functions of several biorhythms are jointly modeled in a multivariate longitudinal fashion, handling both the correlation between biorhythms of multiple outcomes and the correlation between measurements collected over time within the same biological entity. Furthermore, between-subject heterogeneity is also taken into account with the inclusion of random effects. Pairwise comparisons between biorhythms are performed by means of proper contrasts. As an example, we define contrasts which allow us testing whether or not two biorhythms are identical or opposing, providing additional support in clinical practice. Moreover, we illustrate the proposed method using both simulated and biological real data, concerning the comparison of three specific lymphocytes profiles which modulate the function of immune system between healthy subjects and non-small lung cancer patients. Finally, the corresponding SAS syntax is provided. Copyright (c) 2012 John Wiley & Sons, Ltd.
引用
收藏
页码:1125 / 1135
页数:11
相关论文
共 25 条
  • [1] Nonlinear estimation and statistical testing of periods in nonsinusoidal longitudinal time series with unequidistant observations
    Alonso, I
    Fernández, JR
    [J]. CHRONOBIOLOGY INTERNATIONAL, 2001, 18 (02) : 285 - 308
  • [2] BLISS C.I., 1958, PERIODIC REGRESSION
  • [3] Responses of a plant circadian rhythm to thermoperiodic perturbations with asymmetric temporal patterns and the rate of temperature change
    Bohn, A
    Rascher, U
    Hütt, MT
    Kaiser, F
    Lüttge, U
    [J]. BIOLOGICAL RHYTHM RESEARCH, 2002, 33 (02) : 151 - 170
  • [4] Diggle Peter, 2002, Analysis of longitudinal data
  • [5] Cortisol and epinephrine control opposing circadian rhythms in T cell subsets
    Dimitrov, Stoyan
    Benedict, Christian
    Heutling, Dennis
    Westermann, Juergen
    Born, Jan
    Lange, Tanja
    [J]. BLOOD, 2009, 113 (21) : 5134 - 5143
  • [6] Defining chronodisruption
    Erren, Thomas C.
    Reiter, Russel J.
    [J]. JOURNAL OF PINEAL RESEARCH, 2009, 46 (03) : 245 - 247
  • [7] GENERAL-CLASS OF COVARIANCE-STRUCTURES FOR 2 OR MORE REPEATED FACTORS IN LONGITUDINAL DATA-ANALYSIS
    GALECKI, AT
    [J]. COMMUNICATIONS IN STATISTICS-THEORY AND METHODS, 1994, 23 (11) : 3105 - 3119
  • [8] Gao F, 2006, SUGI31 P SAN FRANC C
  • [9] Multivariate random effects meta-analysis of diagnostic tests with multiple thresholds
    Hamza, Taye H.
    Arends, Lidia R.
    van Houwelingen, Hans C.
    Stijnen, Theo
    [J]. BMC MEDICAL RESEARCH METHODOLOGY, 2009, 9
  • [10] Mazzoccoli G, 2011, J BIOL REG HOMEOS AG, V25, P405