Patient-specific pathway analysis using DIGMA identifies key activities in multiple cancers

被引:0
|
作者
Benz, Stephen
Vaske, Charles
Sanborn, J. Zachary
Stuart, Joshua
Haussler, David
机构
关键词
D O I
10.1158/1538-7445.AM10-2015
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
2015
引用
收藏
页数:3
相关论文
共 50 条
  • [1] Patient-specific pathway analysis using DIGMA identifies key activities in multiple cancers
    Benz, Stephen
    Vaske, Charles
    Sanborn, J. Zachary
    Stuart, Joshua
    Haussler, David
    CANCER RESEARCH, 2010, 70
  • [2] Patient-specific pathway analysis using PARADIGM identifies key activities in multiple cancers
    Benz, Stephen C.
    Vaske, Charles
    Ng, Sam
    Sanborn, John Zachary
    Zhu, Jing
    Haussler, David
    Stuart, Joshua
    CANCER RESEARCH, 2011, 71
  • [3] Computational Analysis of Cholangiocarcinoma Phosphoproteomes Identifies Patient-Specific Drug Targets
    Khorsandi, Shirin Elizabeth
    Dokal, Arran D.
    Rajeeve, Vinothini
    Britton, David J.
    Illingworth, Megan S.
    Heaton, Nigel
    Cutillas, Pedro R.
    CANCER RESEARCH, 2021, 81 (22) : 5765 - 5776
  • [4] Patient -Specific Integrative Pathway Analysis Using PARADIGM Identifies Key Activities in I -SPY 1 Breast Cancer Patients (CALGB 150007/150012; ACRIN 6657).
    Wolf, D. M.
    Yau, C.
    Benz, S.
    Vaske, C.
    Stuart, J.
    Roy, R.
    Olshen, A.
    Boudreau, A.
    Haussler, D.
    Gray, J.
    Spellman, P.
    Davis, S.
    Hylton, N.
    Van Veer, L.
    Esserman, L.
    CANCER RESEARCH, 2011, 71
  • [5] Network Modeling Identifies Patient-specific Pathways in Glioblastoma
    Nurcan Tuncbag
    Pamela Milani
    Jenny L. Pokorny
    Hannah Johnson
    Terence T. Sio
    Simona Dalin
    Dennis O. Iyekegbe
    Forest M. White
    Jann N. Sarkaria
    Ernest Fraenkel
    Scientific Reports, 6
  • [6] Network Modeling Identifies Patient-specific Pathways in Glioblastoma
    Tuncbag, Nurcan
    Milani, Pamela
    Pokorny, Jenny L.
    Johnson, Hannah
    Sio, Terence T.
    Dalin, Simona
    Iyekegbe, Dennis O.
    White, Forest M.
    Sarkaria, Jann N.
    Fraenkel, Ernest
    SCIENTIFIC REPORTS, 2016, 6
  • [7] Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM
    Vaske, Charles J.
    Benz, Stephen C.
    Sanborn, J. Zachary
    Earl, Dent
    Szeto, Christopher
    Zhu, Jingchun
    Haussler, David
    Stuart, Joshua M.
    BIOINFORMATICS, 2010, 26 (12) : i237 - i245
  • [8] Integrating Patient-Specific Cardiomyocyte Function With Population Multi-omics Identifies a Novel Arrhythmia Pathway
    Bersell, Kevin R.
    Yang, Tao
    Mosley, Jonathan D.
    Glazer, Andrew M.
    Brown, Jonathan D.
    Campbell, Courtney M.
    Hong, Charles C.
    Wells, Quinn S.
    Johnson, Amanda N.
    Short, Laura
    Blair, Marcia A.
    Behr, Elijah R.
    Petropoulou, Evmorfia
    Jamshidi, Yalda
    Gerszten, Rob
    Benson, Mark D.
    Vasan, Ramachandran S.
    Yang, Qiong
    Jarvik, Gail P.
    Namjou, Bahram
    Shaffer, Christian M.
    Parikh, Shan
    Sheng, Quanhu
    Kannankeril, Prince J.
    Wang, Thomas J.
    Knollmann, Bjorn C.
    Roden, Dan M.
    CIRCULATION, 2017, 136
  • [9] Patient-specific genomic profiling for advanced cancers in young adults
    Cha, Soojin
    Lee, Jeongeun
    Shin, Jong-Yeon
    Kim, Ji-Yeon
    Kim, Jong-Il
    Lee, Se-Hoon
    CANCER RESEARCH, 2015, 75
  • [10] Metabolic and OXPHOS Activities Quantified by Temporalex vivoAnalysis Display Patient-Specific Metabolic Vulnerabilities in Human Breast Cancers
    Koit, Andre
    Timohhina, Natalja
    Truu, Laura
    Chekulayev, Vladimir
    Gudlawar, Shivakumar
    Shevchuk, Igor
    Lepik, Katrin
    Mallo, Lea
    Kutner, Riina
    Valvere, Vahur
    Kaambre, Tuuli
    FRONTIERS IN ONCOLOGY, 2020, 10