Identification, characterization, and genome sequencing of Brevibacterium sediminis MG-1 isolate with growth-promoting properties

被引:7
作者
Lutfullin, Marat Tafkilevich [1 ,2 ]
Lutfullina, Guzel Fanisovna [1 ,2 ]
Pudova, Dasha Sergeevna [2 ]
Akosah, Yaw Abayie [3 ]
Shagimardanova, Elena Ilyasovna [4 ]
Vologin, Semyon Germanovich [5 ]
Sharipova, Margarita Rashidovna [1 ,2 ]
Mardanova, Ayslu Mirkasymovna [1 ,2 ]
机构
[1] Fed Univ, Inst Fundamental Med & Biol, Dept Microbiol, Kazan, Volga Region, Russia
[2] Fed Univ, Inst Fundamental Med & Biol, Lab Agrobioengn, Kazan, Volga Region, Russia
[3] NYU, Coll Dent, Dept Mol Pathobiol, New York, NY USA
[4] Fed Univ, Res Ctr Regulatory Genom, Inst Fundamental Med & Biol, Kazan, Volga Region, Russia
[5] Russian Acad Sci, Dept Breeding & Biotechnol Potatoes, Tatar Res Inst Agr, Fed Res Ctr,Kazan Sci Ctr, Kazan, Russia
基金
俄罗斯科学基金会;
关键词
Rhizosphere; Actinobacteria; Genome sequencing; Auxin production; Siderophore production; Salt stress; SP NOV; ACC DEAMINASE; SALINE SOIL; BACTERIA; RHIZOBACTERIA; RHIZOSPHERE; STRAIN; BIOSYNTHESIS; DIVERSITY; GENES;
D O I
10.1007/s13205-022-03392-z
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In recent years, plant growth-promoting rhizobacteria (PGPR) have received increased attention due to their prospective use as biofertilizers for the enhancement of crop growth and yields. However, there is a growing need to identify new PGPR isolates with additional beneficial properties. In this paper, we describe the identification of a new strain of a non-sporulating Gram-positive bacterium isolated from the rhizosphere of potato plants, classified as Brevibacterium sediminis MG-1 based on whole-genome sequencing. The bacteria are aerobic; they grow in a pH range of 6.0-10.0 (optimum 6.0), and a temperature range of 20-37 degrees C (optimum 30 degrees C). At 96 h of cultivation, strain MG-1 synthesizes 28.65 mu g/ml of indole-3-acetic acid (IAA) when 500 mu g/ml of l-tryptophan is added. It is a producer of catechol-type siderophores and ACC deaminase (213 +/- 12.34 ng/ml) and shows halotolerance. Treatment of pea, rye, and wheat seeds with a suspension of MG-1 strain cells resulted in the stimulation of stem and root biomass accumulation by 12-26% and 6-25% (P < 0.05), respectively. Treatment of seeds with bacteria in the presence of high salt concentration reduced the negative effects of salt stress on plant growth by 18-50%. The hypothetical gene lin, encoding the bacteriocin Linocin-M18, RIPP-like proteins, and polyketide synthase type III (T3PKS) loci, gene clusters responsible for iron acquisition and metabolism of siderophores, as well as gene clusters responsible for auxin biosynthesis, were identified in the B. sediminis MG-1 genome. Thus, the rhizosphere-associated strain B. sediminis MG-1 has growth-stimulating properties and can be useful for the treatment of plants grown on soils with high salinity.
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页数:16
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