NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver

被引:25
作者
Fathi, Fariba [1 ]
Brun, Antonio [2 ]
Rott, Katherine H. [2 ]
Cobra, Paulo Falco [1 ]
Tonelli, Marco [1 ]
Eghbalnia, Hamid R. [1 ]
Caviedes-Vidal, Enrique [3 ,4 ]
Karasov, William H. [2 ]
Markley, John L. [1 ]
机构
[1] Univ Wisconsin, Dept Biochem, 433 Babcock Dr, Madison, WI 53706 USA
[2] Univ Wisconsin, Dept Forest & Wildlife Ecol, 1630 Linden Dr, Madison, WI 53706 USA
[3] Univ Nacl San Luis, Inst Multidisciplinario Invest Biol San Luis, Consejo Nacl Invest Cient & Tecn, RA-5700 San Luis, Argentina
[4] Univ Nacl San Luis, Dept Bioquim & Ciencias Biol, RA-5700 San Luis, Argentina
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
NMR spectroscopy; liver tissue; extraction protocol; metabolite identification by NMR; diet; effect of on liver metabolites; NUCLEAR-MAGNETIC-RESONANCE; METABOLOMIC ANALYSIS; H-1-NMR; SPECTROSCOPY; TISSUES; RATS;
D O I
10.3390/metabo7040061
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Metabolites present in liver provide important clues regarding the physiological state of an organism. The aim of this work was to evaluate a protocol for high-throughput NMR-based analysis of polar and non-polar metabolites from a small quantity of liver tissue. We extracted the tissue with a methanol/chloroform/water mixture and isolated the polar metabolites from the methanol/water layer and the non-polar metabolites from the chloroform layer. Following drying, we re-solubilized the fractions for analysis with a 600 MHz NMR spectrometer equipped with a 1.7 mm cryogenic probe. In order to evaluate the feasibility of this protocol for metabolomics studies, we analyzed the metabolic profile of livers from house sparrow (Passer domesticus) nestlings raised on two different diets: livers from 10 nestlings raised on a high protein diet (HP) for 4 d and livers from 12 nestlings raised on the HP diet for 3 d and then switched to a high carbohydrate diet (HC) for 1 d. The protocol enabled the detection of 52 polar and nine non-polar metabolites in H-1 NMR spectra of the extracts. We analyzed the lipophilic metabolites by one-way ANOVA to assess statistically significant concentration differences between the two groups. The results of our studies demonstrate that the protocol described here can be exploited for high-throughput screening of small quantities of liver tissue (approx. 100 mg wet mass) obtainable from small animals.
引用
收藏
页数:9
相关论文
共 17 条
[1]   Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts [J].
Beckonert, Olaf ;
Keun, Hector C. ;
Ebbels, Timothy M. D. ;
Bundy, Jacob G. ;
Holmes, Elaine ;
Lindon, John C. ;
Nicholson, Jeremy K. .
NATURE PROTOCOLS, 2007, 2 (11) :2692-2703
[2]   Metabolomic study of fatty livers in ducks: Identification by 1H-NMR of metabolic markers associated with technological quality [J].
Bonnefont, Cecile M. D. ;
Guerra, Aurelie ;
Theron, Laetitia ;
Molette, Caroline ;
Canlet, Cecile ;
Fernandez, Xavier .
POULTRY SCIENCE, 2014, 93 (06) :1542-1552
[3]   OBSERVATION OF TISSUE METABOLITES USING P-31 NUCLEAR MAGNETIC-RESONANCE [J].
HOULT, DI ;
BUSBY, SJW ;
GADIAN, DG ;
RADDA, GK ;
RICHARDS, RE ;
SEELEY, PJ .
NATURE, 1974, 252 (5481) :285-287
[4]   1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues [J].
Kruger, Nicholas J. ;
Troncoso-Ponce, M. Adrian ;
Ratcliffe, R. George .
NATURE PROTOCOLS, 2008, 3 (06) :1001-1012
[5]   NMR-based metabolic characterization of chicken tissues and biofluids: a model for avian research [J].
Le Roy, Caroline Ivanne ;
Mappley, Luke John ;
La Ragione, Roberto Marcello ;
Woodward, Martin John ;
Claus, Sandrine Paule .
METABOLOMICS, 2016, 12 (10)
[6]   Integrated metabolomic analysis of the nano-sized copper particle-induced hepatotoxicity and nephrotoxicity in rats: A rapid in vivo screening method for nanotoxicity [J].
Lei, Ronghui ;
Wu, Chunqi ;
Yang, Baohua ;
Ma, Huazhai ;
Shi, Chang ;
Wang, Quanjun ;
Wang, Qingxiu ;
Yuan, Ye ;
Liao, Mingyang .
TOXICOLOGY AND APPLIED PHARMACOLOGY, 2008, 232 (02) :292-301
[7]   Evaluation of metabolite extraction strategies from tissue samples using NMR metabolomics [J].
Lin, Ching Yu ;
Wu, Huifeng ;
Tjeerdema, Ronald S. ;
Viant, Mark R. .
METABOLOMICS, 2007, 3 (01) :55-67
[8]   The future of NMR-based metabolomics [J].
Markley, John L. ;
Bruschweiler, Rafael ;
Edison, Arthur S. ;
Eghbalnia, Hamid R. ;
Powers, Robert ;
Raftery, Daniel ;
Wishart, David S. .
CURRENT OPINION IN BIOTECHNOLOGY, 2017, 43 :34-40
[9]   Changes in the metabolic profile of rat liver after α-tocopherol deficiency as revealed by metabolomics analysis [J].
Moazzami, Ali A. ;
Andersson, Roger ;
Kamal-Eldin, Afaf .
NMR IN BIOMEDICINE, 2011, 24 (05) :499-505
[10]   'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data [J].
Nicholson, JK ;
Lindon, JC ;
Holmes, E .
XENOBIOTICA, 1999, 29 (11) :1181-1189