Framework to study dynamic dependencies in networks of interacting processes

被引:41
作者
Chicharro, Daniel [1 ]
Ledberg, Anders [2 ,3 ]
机构
[1] Ist Italiano Tecnol, Ctr Neurosci & Cognit Syst UniTn, I-38068 Rovereto, TN, Italy
[2] Univ Pompeu Fabra, Ctr Brain & Cognit, Barcelona, Spain
[3] Stockholms Univ, SoRAD, Stockholm, Sweden
关键词
GRANGER CAUSALITY; FUNCTIONAL CONNECTIVITY; THEORETICAL ANALYSIS; INFORMATION-TRANSFER; NONLINEAR CAUSALITY; LINEAR-DEPENDENCE; VISUAL-CORTEX; TIME-SERIES; BRAIN; FEEDBACK;
D O I
10.1103/PhysRevE.86.041901
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
The analysis of dynamic dependencies in complex systems such as the brain helps to understand how emerging properties arise from interactions. Here we propose an information-theoretic framework to analyze the dynamic dependencies in multivariate time-evolving systems. This framework constitutes a fully multivariate extension and unification of previous approaches based on bivariate or conditional mutual information and Granger causality or transfer entropy. We define multi-information measures that allow us to study the global statistical structure of the system as a whole, the total dependence between subsystems, and the temporal statistical structure of each subsystem. We develop a stationary and a nonstationary formulation of the framework. We then examine different decompositions of these multi-information measures. The transfer entropy naturally appears as a term in some of these decompositions. This allows us to examine its properties not as an isolated measure of interdependence but in the context of the complete framework. More generally we use causal graphs to study the specificity and sensitivity of all the measures appearing in these decompositions to different sources of statistical dependence arising from the causal connections between the subsystems. We illustrate that there is no straightforward relation between the strength of specific connections and specific terms in the decompositions. Furthermore, causal and noncausal statistical dependencies are not separable. In particular, the transfer entropy can be nonmonotonic in dependence on the connectivity strength between subsystems and is also sensitive to internal changes of the subsystems, so it should not be interpreted as a measure of connectivity strength. Altogether, in comparison to an analysis based on single isolated measures of interdependence, this framework is more powerful to analyze emergent properties in multivariate systems and to characterize functionally relevant changes in the dynamics.
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页数:24
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共 97 条
  • [1] On directed information theory and Granger causality graphs
    Amblard, Pierre-Olivier
    Michel, Olivier J. J.
    [J]. JOURNAL OF COMPUTATIONAL NEUROSCIENCE, 2011, 30 (01) : 7 - 16
  • [2] Radial basis function approach to nonlinear Granger causality of time series
    Ancona, N
    Marinazzo, D
    Stramaglia, S
    [J]. PHYSICAL REVIEW E, 2004, 70 (05): : 7 - 1
  • [3] [Anonymous], 2006, NEW INTRO MULTIPLE T
  • [4] Information flows in causal networks
    Ay, Nihat
    Polani, Daniel
    [J]. ADVANCES IN COMPLEX SYSTEMS, 2008, 11 (01): : 17 - 41
  • [5] Neural complexity: A graph theoretic interpretation
    Barnett, L.
    Buckley, C. L.
    Bullock, S.
    [J]. PHYSICAL REVIEW E, 2011, 83 (04):
  • [6] Behaviour of Granger causality under filtering: Theoretical invariance and practical application
    Barnett, Lionel
    Seth, Anil K.
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2011, 201 (02) : 404 - 419
  • [7] Granger Causality and Transfer Entropy Are Equivalent for Gaussian Variables
    Barnett, Lionel
    Barrett, Adam B.
    Seth, Anil K.
    [J]. PHYSICAL REVIEW LETTERS, 2009, 103 (23)
  • [8] Multivariate Granger causality and generalized variance
    Barrett, Adam B.
    Barnett, Lionel
    Seth, Anil K.
    [J]. PHYSICAL REVIEW E, 2010, 81 (04):
  • [9] Finding the direction of disturbance propagation in a chemical process using transfer entropy
    Bauer, Margret
    Cox, John W.
    Caveness, Michelle H.
    Downs, James J.
    Thornhill, Nina F.
    [J]. IEEE TRANSACTIONS ON CONTROL SYSTEMS TECHNOLOGY, 2007, 15 (01) : 12 - 21
  • [10] Causal relationships between frequency bands of extracellular signals in visual cortex revealed by an information theoretic analysis
    Besserve, Michel
    Schoelkopf, Bernhard
    Logothetis, Nikos K.
    Panzeri, Stefano
    [J]. JOURNAL OF COMPUTATIONAL NEUROSCIENCE, 2010, 29 (03) : 547 - 566