Direct Observation of Coupling between Structural Fluctuation and Ultrafast Hydration Dynamics of Fluorescent Probes in Anionic Micelles

被引:35
作者
Choudhury, Susobhan [1 ]
Mondal, Prasanna Kumar [1 ]
Sharma, V. K. [2 ]
Mitra, S. [2 ]
Sakai, V. Garcia [3 ]
Mukhopadhyay, R. [2 ]
Pal, Samir Kumar [1 ]
机构
[1] SN Bose Natl Ctr Basic Sci, Dept Chem Biol & Macromol Sci, Kolkata 700098, India
[2] Bhabha Atom Res Ctr, Div Solid State Phys, Bombay 400085, Maharashtra, India
[3] Rutherford Appleton Lab, Sci & Technol Facil Council, Didcot OX11 0QX, Oxon, England
关键词
SOLVATION DYNAMICS; MOLECULAR-DYNAMICS; COLLECTIVE DYNAMICS; BIOLOGICAL WATER; PROTEIN; DNA; ABSORPTION; EVOLUTION; LAW;
D O I
10.1021/jp511899q
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The coupling of structural fluctuation and the dynamics of associated water molecules of biological macromolecules is vital for various biological activities. Although a number of molecular dynamics (MD) studies on proteins/DNA predicted the importance of such coupling, experimental evidence of variation of hydration dynamics with controlled structural fluctuation even in model macromolecule is sparse and raised controversies in the contemporary literature. Here, we have investigated dynamics of hydration at the surfaces of two similar anionic micelles sodium dodecyl sulfate (SDS) and sodium dodecylbenzenesulfonate (SDBS) as model macromolecules using coumarin 500 (C500) as spectroscopic probe with femtosecond to picosecond time resolution up to 20 ns time window. The constituting surfactants SDS and SDBS are structurally similar except one benzene moiety in the SDBS may offer additional rigidity to the SDBS micelles through a-stacking and added bulkiness. The structural integrity of the micelles in the aqueous medium is confirmed in dynamic light scattering (DLS) studies. A variety of studies including polarization gated fluorescence spectroscopy and quasielastic neutron scattering (QENS) have been used to confirm differential structural fluctuation of SDS and SDBS micelles. We have also employed femtosecond-resolved Forster resonance energy transfer (FRET) in order to study binding of a cationic organic ligand ethidium bromide (EtBr) salt at the micellar surfaces. The distance distribution of the donor (C500) acceptor (EtBr) in the micellar media reveals the manifestation of the structural flexibility of the micelles. Our studies on dynamical coupling of the structural flexibility with surface hydration in the nanoscopic micellar media may find the relevance in the "master-slave" type water dynamics in biologically relevant macromolecules.
引用
收藏
页码:10849 / 10857
页数:9
相关论文
共 53 条
[1]   Power-law solvation dynamics in DNA over six decades in time [J].
Andreatta, D ;
Lustres, JLP ;
Kovalenko, SA ;
Ernsting, NP ;
Murphy, CJ ;
Coleman, RS ;
Berg, MA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (20) :7270-7271
[2]   DAVE: A Comprehensive Software Suite for the Reduction, Visualization, and Analysis of Low Energy Neutron Spectroscopic Data [J].
Azuah, Richard Tumanjong ;
Kneller, Larry R. ;
Qiu, Yiming ;
Tregenna-Piggott, Philip L. W. ;
Brown, Craig M. ;
Copley, John R. D. ;
Dimeo, Robert M. .
JOURNAL OF RESEARCH OF THE NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY, 2009, 114 (06) :341-358
[3]   Water as an active constituent in cell biology [J].
Ball, Philip .
CHEMICAL REVIEWS, 2008, 108 (01) :74-108
[4]   Temperature-dependent femtosecond-resolved hydration dynamics of water in aqueous guanidinium hydrochloride solution [J].
Banerjee, Debapriya ;
Verma, Pramod Kumar ;
Pal, Samir Kumar .
PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES, 2009, 8 (10) :1441-1447
[5]   Sequence Dependent Femtosecond-Resolved Hydration Dynamics in the Minor Groove of DNA and Histone-DNA Complexes [J].
Banerjee, Debapriya ;
Makhal, Abhinandan ;
Pal, Samir Kumar .
JOURNAL OF FLUORESCENCE, 2009, 19 (06) :1111-1118
[6]   Ultrafast interfacial solvation dynamics in specific protein DNA recognition [J].
Batabyal, Subrata ;
Mondol, Tanumoy ;
Choudhury, Susobhan ;
Mazumder, Abhishek ;
Pal, Samir Kumar .
BIOCHIMIE, 2013, 95 (11) :2168-2176
[7]  
Bee M., 1988, Quasielastic Neutron Scattering
[8]   Nature of biological water: a femtosecond study [J].
Bhattacharyya, Kankan .
CHEMICAL COMMUNICATIONS, 2008, (25) :2848-2857
[9]   Complex local dynamics in DNA on the picosecond and nanosecond time scales [J].
Brauns, EB ;
Madaras, ML ;
Coleman, RS ;
Murphy, CJ ;
Berg, MA .
PHYSICAL REVIEW LETTERS, 2002, 88 (15) :4
[10]   Molecular dynamics simulation of sodium dodecyl sulfate micelle in water: Micellar structural characteristics and counterion distribution [J].
Bruce, CD ;
Berkowitz, ML ;
Perera, L ;
Forbes, MDE .
JOURNAL OF PHYSICAL CHEMISTRY B, 2002, 106 (15) :3788-3793