Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T

被引:63
作者
Pester, Michael [1 ]
Brambilla, Evelyne [2 ]
Alazard, Didier [3 ]
Rattei, Thomas [4 ]
Weinmaier, Thomas [4 ]
Han, James [5 ]
Lucas, Susan [6 ]
Lapidus, Alla [5 ]
Cheng, Jan-Fang [5 ]
Goodwin, Lynne [6 ]
Pitluck, Sam [5 ]
Peters, Lin [5 ]
Ovchinnikova, Galina [5 ]
Teshima, Hazuki [6 ]
Detter, John C. [5 ,6 ]
Han, Cliff S. [5 ,6 ]
Tapia, Roxanne [5 ,6 ]
Land, Miriam L. [5 ,7 ]
Hauser, Loren [5 ,7 ]
Kyrpides, Nikos C. [5 ]
Ivanova, Natalia N. [5 ]
Pagani, Ioanna [5 ]
Huntmann, Marcel [5 ]
Wei, Chia-Lin [6 ]
Davenport, Karen W. [6 ]
Daligault, Hajnalka [6 ]
Chain, Patrick S. G. [5 ]
Chen, Amy [5 ]
Mavromatis, Konstantinos [5 ]
Markowitz, Victor [6 ]
Szeto, Ernest [5 ]
Mikhailova, Natalia [5 ]
Pati, Amrita [5 ]
Wagner, Michael [1 ]
Woyke, Tanja [5 ]
Ollivier, Bernard [3 ]
Klenk, Hans-Peter [2 ]
Spring, Stefan [2 ]
Loy, Alexander [1 ]
机构
[1] Univ Vienna, Fac Life Sci, Dept Microbial Ecol, Vienna, Austria
[2] Deutsch Sammlung Mikroorganism Zellkultur GmbH, Leibniz Inst, Braunschweig, Germany
[3] Aix Marseille Univ, CNRS, MIO, UMR IRD 235,UMR 7294,Equipe MEB,ESIL, Marseille, France
[4] Univ Vienna, Fac Life Sci, Dept Computat Syst Biol, Vienna, Austria
[5] US DOE, Joint Genome Inst, Walnut Creek, CA USA
[6] Los Alamos Natl Lab, Joint Genome Inst, Biosci Div Genome Sci, Los Alamos, NM USA
[7] Oak Ridge Natl Lab, Biosci Div, Oak Ridge, TN USA
基金
奥地利科学基金会;
关键词
SULFATE-REDUCING BACTERIUM; SP-NOV; REDUCTION;
D O I
10.1128/JB.01392-12
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Desulfosporosinus species are sulfate-reducing bacteria belonging to the Firmicutes. Their genomes will give insights into the genetic repertoire and evolution of sulfate reducers typically thriving in terrestrial environments and able to degrade toluene (Desulfosporosinus youngiae), to reduce Fe(III) (Desulfosporosinus meridiei, Desulfosporosinus orientis), and to grow under acidic conditions (Desulfosporosinus acidiphilus).
引用
收藏
页码:6300 / 6301
页数:2
相关论文
共 24 条
[1]   Genome Sequence of Desulfosporosinus sp OT, an Acidophilic Sulfate-Reducing Bacterium from Copper Mining Waste in Norilsk, Northern Siberia [J].
Abicht, Helge K. ;
Mancini, Stefano ;
Karnachuk, Olga V. ;
Solioz, Marc .
JOURNAL OF BACTERIOLOGY, 2011, 193 (21) :6104-6105
[2]   A NEW SULPHATE-REDUCING VIBRIO [J].
ADAMS, ME ;
POSTGATE, JR .
JOURNAL OF GENERAL MICROBIOLOGY, 1959, 20 (02) :252-257
[3]   Desulfosporosinus acidiphilus sp nov.: a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments [J].
Alazard, Didier ;
Joseph, Manon ;
Battaglia-Brunet, Fabienne ;
Cayol, Jean-Luc ;
Ollivier, Bernard .
EXTREMOPHILES, 2010, 14 (03) :305-312
[4]   Solexa Ltd [J].
Bennett, S .
PHARMACOGENOMICS, 2004, 5 (04) :433-438
[5]   Iron Transformations Induced by an Acid-Tolerant Desulfosporosinus Species [J].
Bertel, Doug ;
Peck, John ;
Quick, Thomas J. ;
Senko, John M. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2012, 78 (01) :81-88
[6]   Sulfate Reduction at pH 4.0 for Treatment of Process and Wastewaters [J].
Bijmans, Martijn F. M. ;
de Vries, Erik ;
Yang, Chun-Hui ;
Buisman, Cees J. N. ;
Lens, Piet N. L. ;
Dopson, Mark .
BIOTECHNOLOGY PROGRESS, 2010, 26 (04) :1029-1037
[7]   Microbial sulfate reduction and metal attenuation in pH 4 acid mine water [J].
Church, Clinton D. ;
Wilkin, Richard T. ;
Alpers, Charles N. ;
Rye, Robert O. ;
McCleskey, R. Blaine .
GEOCHEMICAL TRANSACTIONS, 2007, 8 (1)
[8]   Base-calling of automated sequencer traces using phred.: II.: Error probabilities [J].
Ewing, B ;
Green, P .
GENOME RESEARCH, 1998, 8 (03) :186-194
[9]   Base-calling of automated sequencer traces using phred.: I.: Accuracy assessment [J].
Ewing, B ;
Hillier, L ;
Wendl, MC ;
Green, P .
GENOME RESEARCH, 1998, 8 (03) :175-185
[10]   Consed: A graphical tool for sequence finishing [J].
Gordon, D ;
Abajian, C ;
Green, P .
GENOME RESEARCH, 1998, 8 (03) :195-202