Molecular methods for septicemia diagnosis

被引:13
作者
Marco, Francesc [1 ,2 ]
机构
[1] Hosp Clin Barcelona, Ctr Diagnost Biomed, Serv Microbiol, Barcelona, Spain
[2] Univ Barcelona, Hosp Clin, ISGlobal, Barcelona Inst Global Hlth, Barcelona, Spain
来源
ENFERMEDADES INFECCIOSAS Y MICROBIOLOGIA CLINICA | 2017年 / 35卷 / 09期
关键词
Sepsis; Molecular diagnostics; Rapid diagnostics; BLOOD-STREAM INFECTIONS; RESISTANT STAPHYLOCOCCUS-AUREUS; POLYMERASE-CHAIN-REACTION; RAPID IDENTIFICATION; CRITICALLY-ILL; STAPHSR ASSAY; WHOLE-BLOOD; CULTURE; PCR; BACTERIA;
D O I
10.1016/j.eimc.2017.03.002
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Septicemia remains a major cause of hospital mortality. Blood culture remains the best approach to identify the etiological microorganisms when a bloodstream infection is suspected but it takes long time because it relies on bacterial or fungal growth. The introduction in clinical microbiology laboratories of the matrix-assisted laser desorption ionization time-of-flight mass spectrometry technology, DNA hybridization, microarrays or rapid PCR-based test significantly reduce the time to results. Tests for direct detection in whole blood samples are highly desirable because of their potential to identify bloodstream pathogens without waiting for blood cultures to become positive. Nonetheless, limitations of current molecular diagnostic methods are substantial. This article reviews these new molecular approaches (LightCycler SeptiFast, Magicplex sepsis real time, Septitest, VYOO, PCR/ESI-MS analysis, T2Candida). (C) 2017 Elsevier Espana, S.L.U. and Sociedad Espanola de Enfermedades Infecciosas y Microbiologia Clinica. All rights reserved.
引用
收藏
页码:586 / 592
页数:7
相关论文
共 55 条
[1]   Purification and characterization of PCR-inhibitory components in blood cells [J].
Abu al-Soud, W ;
Rådström, P .
JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (02) :485-493
[2]   Clinical Evaluation of the FilmArray Blood Culture Identification Panel in Identification of Bacteria and Yeasts from Positive Blood Culture Bottles [J].
Altun, Osman ;
Almuhayawi, Mohammed ;
Ullberg, Mans ;
Ozenci, Volkan .
JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (12) :4130-4136
[3]   Epidemiology of severe sepsis in the United States: Analysis of incidence, outcome, and associated costs of care [J].
Angus, DC ;
Linde-Zwirble, WT ;
Lidicker, J ;
Clermont, G ;
Carcillo, J ;
Pinsky, MR .
CRITICAL CARE MEDICINE, 2001, 29 (07) :1303-1310
[4]  
[Anonymous], 2008, INTENS CARE MED, DOI [DOI 10.1007/s00134-007-0934-2, DOI 10.1007/s00134-008-1040-9]
[5]   Improved Sensitivity for Molecular Detection of Bacterial and Candida Infections in Blood [J].
Bacconi, Andrea ;
Richmond, Gregory S. ;
Baroldi, Michelle A. ;
Laffler, Thomas G. ;
Blyn, Lawrence B. ;
Carolan, Heather E. ;
Frinder, Mark R. ;
Toleno, Donna M. ;
Metzgar, David ;
Gutierrez, Jose R. ;
Massire, Christian ;
Rounds, Megan ;
Kennel, Natalie J. ;
Rothman, Richard E. ;
Peterson, Stephen ;
Carroll, Karen C. ;
Wakefield, Teresa ;
Ecker, David J. ;
Sampath, Rangarajan .
JOURNAL OF CLINICAL MICROBIOLOGY, 2014, 52 (09) :3164-3174
[6]   Comparison of the T2Dx instrument with T2Candida assay and automated blood culture in the detection of Candida species using seeded blood samples [J].
Beyda, Nicholas D. ;
Alam, M. Jahangir ;
Garey, Kevin W. .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2013, 77 (04) :324-326
[7]   Rapid identification of pathogens from positive blood cultures by multiplex polymerase chain reaction using the FilmArray system [J].
Blaschke, Anne J. ;
Heyrend, Caroline ;
Byington, Carrie L. ;
Fisher, Mark A. ;
Barker, Elizabeth ;
Garrone, Nicholas F. ;
Thatcher, Stephanie A. ;
Pavia, Andrew T. ;
Barney, Trenda ;
Alger, Garrison D. ;
Daly, Judy A. ;
Ririe, Kirk M. ;
Ota, Irene ;
Poritz, Mark A. .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2012, 74 (04) :349-355
[8]   Evaluation of a Polymerase Chain Reaction Assay for Pathogen Detection in Septic Patients under Routine Condition: An Observational Study [J].
Bloos, Frank ;
Sachse, Svea ;
Kortgen, Andreas ;
Pletz, Mathias W. ;
Lehmann, Marc ;
Straube, Eberhard ;
Riedemann, Niels C. ;
Reinhart, Konrad ;
Bauer, Michael .
PLOS ONE, 2012, 7 (09)
[9]   A multicenter trial to compare blood culture with polymerase chain reaction in severe human sepsis [J].
Bloos, Frank ;
Hinder, Frank ;
Becker, Karsten ;
Sachse, Svea ;
Dessap, Armand Mekontso ;
Straube, Eberhard ;
Cattoir, Vincent ;
Brun-Buisson, Christian ;
Reinhart, Konrad ;
Peters, Georg ;
Bauer, Michael .
INTENSIVE CARE MEDICINE, 2010, 36 (02) :241-247
[10]   Diagnostic accuracy and potential clinical value of the LightCycler SeptiFast assay in the management of bloodstream infections occurring in neutropenic and critically ill patients [J].
Bravo, Dayana ;
Blanquer, Jose ;
Tormo, Mar ;
Aguilar, Gerardo ;
Borras, Rafael ;
Solano, Carlos ;
Clari, Maria A. ;
Costa, Elisa ;
Munoz-Cobo, Beatriz ;
Argueeso, Monica ;
Roberto Pineda, Jose ;
Navarro, David .
INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES, 2011, 15 (05) :E326-E331