SETD2-mediated crosstalk between H3K36me3 and H3K79me2 in MLL-rearranged leukemia

被引:31
作者
Bu, J. [1 ,2 ,3 ]
Chen, A. [1 ,2 ]
Yan, X. [2 ]
He, F. [1 ]
Dong, Y. [2 ]
Zhou, Y. [2 ]
He, J. [1 ]
Zhan, D. [1 ,2 ,3 ]
Lin, P. [2 ]
Hayashi, Y. [2 ]
Sun, Y. [1 ,3 ]
Zhang, Y. [2 ,4 ,5 ,6 ]
Xiao, Z. [4 ,5 ,6 ]
Grimes, H. L. [7 ]
Wang, Q. F. [1 ,3 ]
Huang, G. [2 ]
机构
[1] Chinese Acad Sci, Beijing Inst Genom, Collaborat Innovat Ctr Genet & Dev, Key Lab Genom & Precis Med, Beijing, Peoples R China
[2] Cincinnati Childrens Hosp Med Ctr, Div Pathol & Expt Hematol & Canc Biol, 3333 Burnet Ave,Room S7-607, Cincinnati, OH 45229 USA
[3] Univ Chinese Acad Sci, Beijing, Peoples R China
[4] Chinese Acad Med Sci, Inst Hematol, State Key Lab Expt Hematol, Tianjin, Peoples R China
[5] Chinese Acad Med Sci, Blood Dis Hosp, Tianjin, Peoples R China
[6] Peking Union Med Coll, Tianjin, Peoples R China
[7] Cincinnati Childrens Hosp Med Ctr, Div Immunol, Cincinnati, OH 45229 USA
基金
美国国家卫生研究院; 中国国家自然科学基金;
关键词
ACUTE MYELOID-LEUKEMIA; RNA-POLYMERASE-II; TRANSCRIPTION FACTOR ERG; MYELODYSPLASTIC SYNDROMES; LYMPHOBLASTIC-LEUKEMIA; LYMPHOCYTIC-LEUKEMIA; SOMATIC MUTATIONS; HISTONE H3; METHYLATION; CELLS;
D O I
10.1038/leu.2017.339
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Previously, we identified SETD2 loss-of-function mutations in 22% of MLL-rearranged (MLLr) acute leukemia patients, implicating a mechanism for cooperativity between SETD2 mutations and MLL fusions. However, the detailed mechanism of how SETD2-H3K36me3 downregulation accelerates MLLr leukemia remains unclear. Here, we show that in MLLr leukemia, both H3K79me2 and H3K36me3 are aberrantly elevated and co-enriched in a group of genes. SETD2 inactivation leads to a global reduction of H3K36me3 and a further elevation of H3K79me2, but does not change the expression of known MLL fusion target genes. Instead, this pattern of histone changes is associated with transcriptional deregulation of a novel set of genes; downregulating tumor suppressors (for example, ASXL1) and upregulating oncogenes (for example, ERG). Taken together, our findings reveal a global crosstalk between the oncogenic DOT1L-H3K79me2 axis and the tumor suppressive SETD2-H3K36me3 axis in gene regulation, provide molecular insights into how SETD2 mutations accelerate MLLr leukemogenesis through differential regulation of additional tumor suppressors and oncogenes.
引用
收藏
页码:890 / 899
页数:10
相关论文
共 34 条
[1]   ASXL1 Mutations Promote Myeloid Transformation through Loss of PRC2-Mediated Gene Repression [J].
Abdel-Wahab, Omar ;
Adli, Mazhar ;
LaFave, Lindsay M. ;
Gao, Jie ;
Hricik, Todd ;
Shih, Alan H. ;
Pandey, Suveg ;
Patel, Jay P. ;
Chung, Young Rock ;
Koche, Richard ;
Perna, Fabiana ;
Zhao, Xinyang ;
Taylor, Jordan E. ;
Park, Christopher Y. ;
Carroll, Martin ;
Melnick, Ari ;
Nimer, Stephen D. ;
Jaffe, Jacob D. ;
Aifantis, Iannis ;
Bernstein, Bradley E. ;
Levine, Ross L. .
CANCER CELL, 2012, 22 (02) :180-193
[2]   The landscape of somatic mutations in infant MLL-rearranged acute lymphoblastic leukemias [J].
Andersson, Anna K. ;
Ma, Jing ;
Wang, Jianmin ;
Chen, Xiang ;
Gedman, Amanda Larson ;
Dang, Jinjun ;
Nakitandwe, Joy ;
Holmfeldt, Linda ;
Parker, Matthew ;
Easton, John ;
Huether, Robert ;
Kriwacki, Richard ;
Rusch, Michael ;
Wu, Gang ;
Li, Yongjin ;
Mulder, Heather ;
Raimondi, Susana ;
Pounds, Stanley ;
Kang, Guolian ;
Shi, Lei ;
Becksfort, Jared ;
Gupta, Pankaj ;
Payne-Turner, Debbie ;
Vadodaria, Bhavin ;
Boggs, Kristy ;
Yergeau, Donald ;
Manne, Jayanthi ;
Song, Guangchun ;
Edmonson, Michael ;
Nagahawatte, Panduka ;
Wei, Lei ;
Cheng, Cheng ;
Pei, Deqing ;
Sutton, Rosemary ;
Venn, Nicola C. ;
Chetcuti, Albert ;
Rush, Amanda ;
Catchpoole, Daniel ;
Heldrup, Jesper ;
Fioretos, Thoas ;
Lu, Charles ;
Ding, Li ;
Pui, Ching-Hon ;
Shurtleff, Sheila ;
Mullighan, Charles G. ;
Mardis, Elaine R. ;
Wilson, Richard K. ;
Gruber, Tanja A. ;
Zhang, Jinghui ;
Downing, James R. .
NATURE GENETICS, 2015, 47 (04) :330-U192
[3]   Extracellular nicotinamide phosphoribosyltransferase (NAMPT) promotes M2 macrophage polarization in chronic lymphocytic leukemia [J].
Audrito, Valentina ;
Serra, Sara ;
Brusa, Davide ;
Mazzola, Francesca ;
Arruga, Francesca ;
Vaisitti, Tiziana ;
Coscia, Marta ;
Maffei, Rossana ;
Rossi, Davide ;
Wang, Tao ;
Inghirami, Giorgio ;
Rizzi, Menico ;
Gaidano, Gianluca ;
Garcia, Joe G. N. ;
Wolberger, Cynthia ;
Raffaelli, Nadia ;
Deaglio, Silvia .
BLOOD, 2015, 125 (01) :111-123
[4]   High expression of the ETS transcription factor ERG predicts adverse outcome in acute T-lymphoblastic leukemia in adults [J].
Baldus, Claudia D. ;
Burmeister, Thomas ;
Martus, Peter ;
Schwartz, Stefan ;
Goekbuget, Nicola ;
Bloomfield, Clara D. ;
Hoelzer, Dieter ;
Thiel, Eckhard ;
Hofmann, Wolf K. .
JOURNAL OF CLINICAL ONCOLOGY, 2006, 24 (29) :4714-4720
[5]   Spatial distribution of di- and tri-methyl lysine 36 of histone H3 at active genes [J].
Bannister, AJ ;
Schneider, R ;
Myers, FA ;
Thorne, AW ;
Crane-Robinson, C ;
Kouzarides, T .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (18) :17732-17736
[6]   Clinical Effect of Point Mutations in Myelodysplastic Syndromes [J].
Bejar, Rafael ;
Stevenson, Kristen ;
Abdel-Wahab, Omar ;
Galili, Naomi ;
Nilsson, Bjoern ;
Garcia-Manero, Guillermo ;
Kantarjian, Hagop ;
Raza, Azra ;
Levine, Ross L. ;
Neuberg, Donna ;
Ebert, Benjamin L. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 364 (26) :2496-2506
[7]   MLL-Rearranged Leukemia Is Dependent on Aberrant H3K79 Methylation by DOT1L [J].
Bernt, Kathrin M. ;
Zhu, Nan ;
Sinha, Amit U. ;
Vempati, Sridhar ;
Faber, Joerg ;
Krivtsov, Andrei V. ;
Feng, Zhaohui ;
Punt, Natalie ;
Daigle, Amanda ;
Bullinger, Lars ;
Pollock, Roy M. ;
Richon, Victoria M. ;
Kung, Andrew L. ;
Armstrong, Scott A. .
CANCER CELL, 2011, 20 (01) :66-78
[8]   Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes [J].
Dalgliesh, Gillian L. ;
Furge, Kyle ;
Greenman, Chris ;
Chen, Lina ;
Bignell, Graham ;
Butler, Adam ;
Davies, Helen ;
Edkins, Sarah ;
Hardy, Claire ;
Latimer, Calli ;
Teague, Jon ;
Andrews, Jenny ;
Barthorpe, Syd ;
Beare, Dave ;
Buck, Gemma ;
Campbell, Peter J. ;
Forbes, Simon ;
Jia, Mingming ;
Jones, David ;
Knott, Henry ;
Kok, Chai Yin ;
Lau, King Wai ;
Leroy, Catherine ;
Lin, Meng-Lay ;
McBride, David J. ;
Maddison, Mark ;
Maguire, Simon ;
McLay, Kirsten ;
Menzies, Andrew ;
Mironenko, Tatiana ;
Mulderrig, Lee ;
Mudie, Laura ;
O'Meara, Sarah ;
Pleasance, Erin ;
Rajasingham, Arjunan ;
Shepherd, Rebecca ;
Smith, Raffaella ;
Stebbings, Lucy ;
Stephens, Philip ;
Tang, Gurpreet ;
Tarpey, Patrick S. ;
Turrell, Kelly ;
Dykema, Karl J. ;
Khoo, Sok Kean ;
Petillo, David ;
Wondergem, Bill ;
Anema, John ;
Kahnoski, Richard J. ;
Teh, Bin Tean ;
Stratton, Michael R. .
NATURE, 2010, 463 (7279) :360-363
[9]   AF10 Regulates Progressive H3K79 Methylation and HOX Gene Expression in Diverse AML Subtypes [J].
Deshpande, Aniruddha J. ;
Deshpande, Anagha ;
Sinha, Amit U. ;
Chen, Liying ;
Chang, Jenny ;
Cihan, Ali ;
Fazio, Maurizio ;
Chen, Chun-wei ;
Zhu, Nan ;
Koche, Richard ;
Dzhekieva, Liuda ;
Ibanez, Gloria ;
Dias, Stuart ;
Banka, Deepti ;
Krivtsov, Andrei ;
Luo, Minkui ;
Roeder, Robert G. ;
Bradner, James E. ;
Bernt, Kathrin M. ;
Armstrong, Scott A. .
CANCER CELL, 2014, 26 (06) :896-908
[10]   Histone Methyltransferase Gene SETD2 Is a Novel Tumor Suppressor Gene in Clear Cell Renal Cell Carcinoma [J].
Duns, Gerben ;
van den Berg, Eva ;
van Duivenbode, Inge ;
Osinga, Jan ;
Hollema, Harry ;
Hofstra, Robert M. W. ;
Kok, Klaas .
CANCER RESEARCH, 2010, 70 (11) :4287-4291