A comparison of two approaches to extracting Cryptosporidium DNA from human stools as measured by a real-time PCR assay

被引:36
作者
Elwin, K. [1 ]
Robinson, G. [1 ]
Hadfield, S. J. [1 ]
Fairclough, H. V. [2 ]
Iturriza-Gomara, M. [3 ]
Chalmers, R. M. [1 ]
机构
[1] Singleton Hosp, UK Cryptosporidium Reference Unit, Swansea SA2 8QA, W Glam, Wales
[2] Aberystwyth Univ, Inst Biol Environm & Rural Sci, Aberystwyth SY23 3DA, Ceredigion, Wales
[3] Hlth Protect Agcy, Virus Reference Dept, MS Colindale, London NW9 5EQ, England
关键词
Cryptosporidium; DNA extraction; Real time PCR; FECAL SAMPLES; RAPID METHOD; HUMAN FECES; PARVUM; SPECIFICITY; SENSITIVITY; DIAGNOSIS; OOCYSTS;
D O I
10.1016/j.mimet.2012.02.006
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Direct extraction of Cryptosporidium DNA from 46 stools by bead-beating, guanidine thiocyanate and silica purification provided slightly lower PCR positivity (93.5% vs. 100%) and higher threshold cycle values (mean 34.93 vs. 28.03; P = 0.00) than spin-column extraction from boiled, semi-purified oocyst suspensions. However, direct extraction is cheaper, and amenable to automation. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:38 / 40
页数:3
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