Characterization of the complete chloroplast genome of Carallia diplopetala (Rhizophoraceae)

被引：0

作者：

Wang, Renjie ^{[1
]}

Liao, Nanyan ^{[2
]}

Liu, Xiongsheng ^{[1
]}

Qin, Yi ^{[2
]}

Xiao, Yufei ^{[1
]}

Wang, Yong ^{[1
]}

Huang, Ronglin ^{[1
]}

机构：

[1] Guangxi Zhuang Autonomous Reg Forestry Res Inst, Nanning, Peoples R China

[2] Camellias Natl Nat Reserve, Guangxi Fangcheng Golden, Fangchenggang, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 10期

关键词：

Carallia diplopetala; Rhizophoraceae; chloroplast genome; phylogeny; SEQUENCE;

D O I：

10.1080/23802359.2022.2135398

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Carallia diplopetala (Rhizophoraceae) is an important economic tree species narrowly distributed endemic to East Asia. In this study, We generate the complete chloroplast genome of C. diplopetala using next-generation sequencing technology, which is 162,052 bp in size and consists of a large single copy (LSC) of 89,556 bp and a small single copy (SSC) of 18,814 bp, separated a pair of inverted repeats (IRb and IRa) of 26,841 bp. The overall GC content is 36.4%. A total of 130 genes are annotated, including 83 protein-coding genes, 37 tRNAs, eight rRNAs and two pseudogenes (psi ycf1 and psi rps19). The phylogenetic analysis indicated that C. diplopetala and C. brachiate formed a monophyletic clade with strong support and then sister to Pellacalyx yunnanensis. The plastome of C. diplopetala will provide informative genomic resources for further conservation applications.

引用

页码：1870 / 1872

页数：3

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