Characterization of the complete chloroplast genome of Carallia diplopetala (Rhizophoraceae)

被引:0
作者
Wang, Renjie [1 ]
Liao, Nanyan [2 ]
Liu, Xiongsheng [1 ]
Qin, Yi [2 ]
Xiao, Yufei [1 ]
Wang, Yong [1 ]
Huang, Ronglin [1 ]
机构
[1] Guangxi Zhuang Autonomous Reg Forestry Res Inst, Nanning, Peoples R China
[2] Camellias Natl Nat Reserve, Guangxi Fangcheng Golden, Fangchenggang, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 10期
关键词
Carallia diplopetala; Rhizophoraceae; chloroplast genome; phylogeny; SEQUENCE;
D O I
10.1080/23802359.2022.2135398
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Carallia diplopetala (Rhizophoraceae) is an important economic tree species narrowly distributed endemic to East Asia. In this study, We generate the complete chloroplast genome of C. diplopetala using next-generation sequencing technology, which is 162,052 bp in size and consists of a large single copy (LSC) of 89,556 bp and a small single copy (SSC) of 18,814 bp, separated a pair of inverted repeats (IRb and IRa) of 26,841 bp. The overall GC content is 36.4%. A total of 130 genes are annotated, including 83 protein-coding genes, 37 tRNAs, eight rRNAs and two pseudogenes (psi ycf1 and psi rps19). The phylogenetic analysis indicated that C. diplopetala and C. brachiate formed a monophyletic clade with strong support and then sister to Pellacalyx yunnanensis. The plastome of C. diplopetala will provide informative genomic resources for further conservation applications.
引用
收藏
页码:1870 / 1872
页数:3
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