Structural optimization of molecular clusters with density functional theory combined with basin hopping

被引:44
作者
Do, Hainam [1 ]
Besley, Nicholas A. [1 ]
机构
[1] Univ Nottingham, Sch Chem, Nottingham NG7 2RD, England
基金
英国工程与自然科学研究理事会;
关键词
LOWEST-ENERGY STRUCTURES; GLOBAL GEOMETRY OPTIMIZATION; MASS-SPECTROMETRIC ANALYSIS; DIFFUSION EQUATION METHOD; MULTIPLE-MINIMA PROBLEM; AB-INITIO; GENETIC-ALGORITHM; ADIABATIC EXPANSION; METHANOL CLUSTERS; INFRARED-SPECTRA;
D O I
10.1063/1.4755994
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Identifying the energy minima of molecular clusters is a challenging problem. Traditionally, search algorithms such as simulated annealing, genetic algorithms, or basin hopping are usually used in conjunction with empirical force fields. We have implemented a basin hopping search algorithm combined with density functional theory to enable the optimization of molecular clusters without the need for empirical force fields. This approach can be applied to systems where empirical potentials are not available or may not be sufficiently accurate. We illustrate the effectiveness of the method with studies on water, methanol, and water + methanol clusters as well as protonated water and methanol clusters at the B3LYP+D/6-31+G* level of theory. A new lowest energy structure for H+(H2O)(7) is predicted at the B3LYP+D/6-31+G* level. In all of the protonated mixed water and methanol clusters, we find that H+ prefers to combine with methanol rather than water in the lowest-energy structures. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4755994]
引用
收藏
页数:9
相关论文
共 77 条
[1]   Search for the Lin0/+1/-1 (n=5-7) lowest-energy structures using the ab initio Gradient Embedded Genetic Algorithm (GEGA).: Elucidation of the chemical bonding in the lithium clusters [J].
Alexandrova, AN ;
Boldyrev, AI .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2005, 1 (04) :566-580
[2]   H•(H2O)n Clusters: Microsolvation of the Hydrogen Atom via Molecular ab Initio Gradient Embedded Genetic Algorithm (GEGA) [J].
Alexandrova, Anastassia N. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2010, 114 (48) :12591-12599
[3]   Structural evolution of anionic silicon clusters SiN (20 ≤ n ≤ 45) [J].
Bai, J ;
Cui, LF ;
Wang, JL ;
Yoo, SH ;
Li, X ;
Jellinek, J ;
Koehler, C ;
Frauenheim, T ;
Wang, LS ;
Zeng, XC .
JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (03) :908-912
[4]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[5]   A density functional study of methanol clusters [J].
Boyd, Susan L. ;
Boyd, Russell J. .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2007, 3 (01) :54-61
[6]   Surface vibrations of argon clusters by helium atom scattering [J].
Buck, U ;
Krohne, R ;
Lohbrandt, P .
JOURNAL OF CHEMICAL PHYSICS, 1997, 106 (08) :3205-3215
[7]   Structure and spectra of three-dimensional (H2O)n clusters, n = 8, 9, 10 [J].
Buck, U ;
Ettischer, I ;
Melzer, M ;
Buch, V ;
Sadlej, J .
PHYSICAL REVIEW LETTERS, 1998, 80 (12) :2578-2581
[8]   Lowest-energy structures of water clusters (H2O)11 and (H2O)13 [J].
Bulusu, Satya ;
Yoo, Soohaeng ;
Apra, Edo ;
Xantheas, Sotiris ;
Zeng, Xiao Cheng .
JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (42) :11781-11784
[9]   Theoretical characterization of the (H2O)21 cluster:: Application of an n-body decomposition procedure [J].
Cui, Jun ;
Liu, Hanbin ;
Jordan, Kenneth D. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (38) :18872-18878
[10]   Structural Characterization of the (Methanol)4 Potential Energy Surface [J].
David, Jorge ;
Guerra, Doris ;
Restrepo, Albeiro .
JOURNAL OF PHYSICAL CHEMISTRY A, 2009, 113 (38) :10167-10173