Transcriptome and proteome analyses of resistant preharvest peanut seed coat in response to Aspergillus flavus infection

被引:19
作者
Zhao, Xiaobo [1 ]
Li, Chunjuan [1 ]
Yan, Caixia [1 ]
Wang, Juan [1 ]
Yuan, Cuiling [1 ]
Zhang, Hao [1 ]
Shan, Shihua [1 ]
机构
[1] Shandong Peanut Res Inst, Lab Genet & Breeding, Qingdao 266100, Shandong, Peoples R China
关键词
Aflatoxins; Arachis hypogaea; Aspergillus flavus; Chitinase; Hevamine-A; Peanut genome; Proteome; RNA-seq; TMT; Transcriptome; GENE-EXPRESSION; IDENTIFICATION; XYLOGLUCAN; DEFENSE; FAMILY; GROWTH; CHITINASE; PROTEINS; CLONING; ROLES;
D O I
10.1016/j.ejbt.2019.03.003
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: The infection of peanut (Arachis hypogaea L.) seed coat by the pathogenic fungus Aspergillus flavus has highly negative economic and health impacts. However, the molecular mechanism underlying such defense response remains poorly understood. This study aims to address this issue by profiling the transcriptomic and proteomic changes that occur during the infection of the resistant peanut cultivar J11 by A. flavus. Results: Transcriptomic study led to the detection of 13,539 genes, among which 663 exhibited differential expression. Further functional analysis found the differentially expressed genes to encode a wide range of pathogenesis- and/or defense-related proteins such as transcription factors, pathogenesis-related proteins, and chitinases. Changes in the expression patterns of these genes might contribute to peanut resistance to A. flavus. On the other hand, the proteomic profiling showed that 314 of the 1382 detected protein candidates were aberrantly expressed as a result of A. flavus invasion. However, the correlation between the transcriptomic and proteomic data was poor. We further demonstrated by in vitro fungistasis tests that hevamine-A, which was enriched at both transcript and protein levels, could directly inhibit the growth of A. flavus. Conclusions: The results demonstrate the power of complementary transcriptomic and proteomic analyses in the study of pathogen defense and resistance in plants and the chitinase could play an important role in the defense response of peanut to A. flavus. The current study also constitutes the first step toward building an integrated omics data platform for the development of Aspergillus-resistant peanut cultivars. (C) 2019 Pontificia Universidad Catolica de Valparaiso. Production and hosting by Elsevier B.V. All rights reserved.
引用
收藏
页码:82 / 90
页数:9
相关论文
共 41 条
[1]   Pathogenesis related-10 proteins are small, structurally similar but with diverse role in stress signaling [J].
Agarwal, Parinita ;
Agarwal, Pradeep K. .
MOLECULAR BIOLOGY REPORTS, 2014, 41 (02) :599-611
[2]   The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut [J].
Bertioli, David John ;
Cannon, Steven B. ;
Froenicke, Lutz ;
Huang, Guodong ;
Farmer, Andrew D. ;
Cannon, Ethalinda K. S. ;
Liu, Xin ;
Gao, Dongying ;
Clevenger, Josh ;
Dash, Sudhansu ;
Ren, Longhui ;
Moretzsohn, Marcio C. ;
Shirasawa, Kenta ;
Huang, Wei ;
Vidigal, Bruna ;
Abernathy, Brian ;
Chu, Ye ;
Niederhuth, Chad E. ;
Umale, Pooja ;
Araujo, Ana Claudia G. ;
Kozik, Alexander ;
Do Kim, Kyung ;
Burow, Mark D. ;
Varshney, Rajeev K. ;
Wang, Xingjun ;
Zhang, Xinyou ;
Barkley, Noelle ;
Guimaraes, Patricia M. ;
Isobe, Sachiko ;
Guo, Baozhu ;
Liao, Boshou ;
Stalker, H. Thomas ;
Schmitz, Robert J. ;
Scheffler, Brian E. ;
Leal-Bertioli, Soraya C. M. ;
Xun, Xu ;
Jackson, Scott A. ;
Michelmore, Richard ;
Ozias-Akins, Peggy .
NATURE GENETICS, 2016, 48 (04) :438-+
[3]   Trimmomatic: a flexible trimmer for Illumina sequence data [J].
Bolger, Anthony M. ;
Lohse, Marc ;
Usadel, Bjoern .
BIOINFORMATICS, 2014, 30 (15) :2114-2120
[4]   Effect of Arabinogalactan Proteins from the Root Caps of Pea and Brassica napus on Aphanomyces euteiches Zoospore Chemotaxis and Germination [J].
Cannesan, Marc Antoine ;
Durand, Caroline ;
Burel, Carole ;
Gangneux, Christophe ;
Lerouge, Patrice ;
Ishii, Tadashi ;
Laval, Karine ;
Follet-Gueye, Marie-Laure ;
Driouich, Azeddine ;
Vicre-Gibouin, Maite .
PLANT PHYSIOLOGY, 2012, 159 (04) :1658-1670
[5]   Disrupting two Arabidopsis thaliana xylosyltransferase genes results in plants deficient in xyloglucan, a major primary cell wall component [J].
Cavalier, David M. ;
Lerouxel, Olivier ;
Neumetzler, Lutz ;
Yamauchi, Kazuchika ;
Reinecke, Antje ;
Freshour, Glenn ;
Zabotina, Olga A. ;
Hahn, Michael G. ;
Burgert, Ingo ;
Pauly, Markus ;
Raikhel, Natasha V. ;
Keegstra, Kenneth .
PLANT CELL, 2008, 20 (06) :1519-1537
[6]   Comparative Transcriptome Profiling of a Resistant vs. Susceptible Tomato (Solanum lycopersicum) Cultivar in Response to Infection by Tomato Yellow Leaf Curl Virus [J].
Chen, Tianzi ;
Lv, Yuanda ;
Zhao, Tongming ;
Li, Nan ;
Yang, Yuwen ;
Yu, Wengui ;
He, Xin ;
Liu, Tingli ;
Zhang, Baolong .
PLOS ONE, 2013, 8 (11)
[7]   Validation of reference genes for gene expression studies in peanut by quantitative real-time RT-PCR [J].
Chi, Xiaoyuan ;
Hu, Ruibo ;
Yang, Qingli ;
Zhang, Xiaowen ;
Pan, Lijuan ;
Chen, Na ;
Chen, Mingna ;
Yang, Zhen ;
Wang, Tong ;
He, Yanan ;
Yu, Shanlin .
MOLECULAR GENETICS AND GENOMICS, 2012, 287 (02) :167-176
[8]   Connecting Growth and Defense: The Emerging Roles of Brassinosteroids and Gibberellins in Plant Innate Immunity [J].
De Bruyne, Lieselotte ;
Hofte, Monica ;
De Vleesschauwer, David .
MOLECULAR PLANT, 2014, 7 (06) :943-959
[9]   Involvement of the xyloglucan endotransglycosylase/hydrolases encoded by celery XTH1 and Arabidopsis XTH33 in the phloem response to aphids [J].
Divol, Fanchon ;
Vilaine, Francoise ;
Thibivilliers, Sandra ;
Kusiak, Chantal ;
Sauge, Marie Helene ;
Dinant, Sylvie .
PLANT CELL AND ENVIRONMENT, 2007, 30 (02) :187-201
[10]   Plantacyanin plays a role in reproduction in Arabidopsis [J].
Dong, J ;
Kim, ST ;
Lord, EM .
PLANT PHYSIOLOGY, 2005, 138 (02) :778-789