Uncertainty and variability in computational and mathematical models of cardiac physiology

被引:106
作者
Mirams, Gary R. [1 ]
Pathmanathan, Pras [2 ]
Gray, Richard A. [2 ]
Challenor, Peter [3 ]
Clayton, Richard H. [4 ,5 ]
机构
[1] Univ Oxford, Dept Comp Sci, Computat Biol, Oxford OX1 3QD, England
[2] US FDA, 10903 New Hampshire Ave, Silver Spring, MD 20993 USA
[3] Univ Exeter, Coll Engn Math & Phys Sci, Exeter EX4 4QF, Devon, England
[4] Univ Sheffield, Insigneo Inst In Silico Med, Sheffield S1 4DP, S Yorkshire, England
[5] Univ Sheffield, Dept Comp Sci, Sheffield S1 4DP, S Yorkshire, England
来源
JOURNAL OF PHYSIOLOGY-LONDON | 2016年 / 594卷 / 23期
基金
英国工程与自然科学研究理事会; 英国惠康基金;
关键词
PULSE-WAVE PROPAGATION; FISTULA SURGERY. PART; SENSITIVITY-ANALYSIS; REPOLARIZATION VARIABILITY; MARKOV-MODELS; ION CHANNELS; ELECTROPHYSIOLOGY; PREDICTION; PERSONALIZATION; QUANTIFICATION;
D O I
10.1113/JP271671
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
The Cardiac Physiome effort is one of the most mature and successful applications of mathematical and computational modelling for describing and advancing the understanding of physiology. After five decades of development, physiological cardiac models are poised to realise the promise of translational research via clinical applications such as drug development and patient-specific approaches as well as ablation, cardiac resynchronisation and contractility modulation therapies. For models to be included as a vital component of the decision process in safety-critical applications, rigorous assessment of model credibility will be required. This White Paper describes one aspect of this process by identifying and classifying sources of variability and uncertainty in models as well as their implications for the application and development of cardiac models. We stress the need to understand and quantify the sources of variability and uncertainty in model inputs, and the impact of model structure and complexity and their consequences for predictive model outputs. We propose that the future of the Cardiac Physiome should include a probabilistic approach to quantify the relationship of variability and uncertainty of model inputs and outputs.
引用
收藏
页码:6833 / 6847
页数:15
相关论文
共 83 条
[1]  
[Anonymous], OXFORD HDB APPL BAYE
[2]  
[Anonymous], UNCERTAINTY QUANTIFI
[3]  
[Anonymous], 2014, UNCERTAINTY QUANTIFI
[4]  
[Anonymous], 2008, ENG DESIGN VIA SURRO
[5]   The Cardiac Physiome: perspectives for the future [J].
Bassingthwaighte, James ;
Hunter, Peter ;
Noble, Denis .
EXPERIMENTAL PHYSIOLOGY, 2009, 94 (05) :597-605
[6]   Diagnostics for Gaussian Process Emulators [J].
Bastos, Leonardo S. ;
O'Hagan, Anthony .
TECHNOMETRICS, 2009, 51 (04) :425-438
[7]   The quiet revolution of numerical weather prediction [J].
Bauer, Peter ;
Thorpe, Alan ;
Brunet, Gilbert .
NATURE, 2015, 525 (7567) :47-55
[8]   Forward Problem of Electrocardiography Is It Solved? [J].
Bear, Laura R. ;
Cheng, Leo K. ;
LeGrice, Ian J. ;
Sands, Gregory B. ;
Lever, Nigel A. ;
Paterson, David J. ;
Smaill, Bruce H. .
CIRCULATION-ARRHYTHMIA AND ELECTROPHYSIOLOGY, 2015, 8 (03) :677-684
[9]   Stochastic finite element: a non intrusive approach by regression [J].
Berveiller, Marc ;
Sudret, Bruno ;
Lemaire, Maurice .
EUROPEAN JOURNAL OF COMPUTATIONAL MECHANICS, 2006, 15 (1-3) :81-92
[10]   Experimentally calibrated population of models predicts and explains intersubject variability in cardiac cellular electrophysiology [J].
Britton, Oliver J. ;
Bueno-Orovio, Alfonso ;
Van Ammel, Karel ;
Lu, Hua Rong ;
Towart, Rob ;
Gallacher, David J. ;
Rodriguez, Blanca .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (23) :E2098-E2105