Comparative genomic analysis of novel bacteriophages infecting Vibrio parahaemolyticus isolated from western and southern coastal areas of Korea

被引：11

作者：

Yu, Junhyeok ^{[1
,2
]}

Lim, Jeong-A ^{[1
]}

Kwak, Su-Jin ^{[1
]}

Park, Jong-Hyun ^{[2
]}

Chang, Hyun-Joo ^{[1
,3
]}

机构：

[1] Korea Food Res Inst, Food Safety Res Grp, Wanju Gun 55365, South Korea

[2] Gachon Univ, Dept Food & Biotechnol, Sungnam 13120, South Korea

[3] Korea Res Inst Chem Technol, Ctr Convergent Res Emerging Virus Infect, 141 Gajeong Ro, Daejeon 34114, South Korea

来源：

ARCHIVES OF VIROLOGY | 2018年 / 163卷 / 05期

关键词：

Vibrio parahaemolyticus; bacteriophage; comparative analysis; genomic similarity; phylogenetic tree; VULNIFICUS; SEQUENCE; DNA;

D O I：

10.1007/s00705-018-3756-3

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Vibrio parahaemolyticus, a foodborne pathogen, has become resistant to antibiotics. Therefore, alternative bio-control agents such bacteriophage are urgently needed for its control. Six novel bacteriophages specific to V. parahaemolyticus (vB_VpaP_KF1 similar to 2, vB_VpaS_KF3 similar to 6) were characterized at the molecular level in this study. Genomic similarity analysis revealed that these six bacteriophages could be divided into two groups with different genomic features, phylogenetic grouping, and morphologies. Two groups of bacteriophages had their own genes with different mechanisms for infection, assembly, and metabolism. Our results could be used as a future reference to study phage genomics or apply phages in future bio-control studies.

引用

页码：1337 / 1343

页数：7

共 30 条

[1] Bio-Control of Salmonella Enteritidis in Foods Using Bacteriophages [J].

Bao, Hongduo ;

Zhang, Pengyu ;

Zhang, Hui ;

Zhou, Yan ;

Zhang, Lili ;

Wang, Ran .

VIRUSES-BASEL, 2015, 7 (08) :4836-4853

[2] A new group of cosmopolitan bacteriophages induce a carrier state in the pandemic strain of Vibrio parahaemolyticus [J].

Bastias, Roberto ;

Higuera, Gaston ;

Sierralta, Walter ;

Espejo, Romilio T. .

ENVIRONMENTAL MICROBIOLOGY, 2010, 12 (04) :990-1000

[3]

Carlson K, 2005, BACTERIOPHAGE: BIOLOGY AND APPLICATIONS, P437

[4]

CDC (2013) Antibiotic resistance threats in the United States, 2013, CURRENT, V114, P5

[5]

Centers for Disease Control and Prevention, 2013, VIBR ILLN VIBR VIBR

[6] Growth inhibitory effect of bacteriophages isolated from western and southern coastal areas of Korea against Vibrio parahaemolyticus in Manila clams [J].

Chang, Hyun-Joo ;

Hong, Jeil ;

Lee, Nari ;

Chun, Hyang Sook ;

Kim, Hwa Yeon ;

Choi, Sung-Wook ;

Ok, Gyeongsik .

APPLIED BIOLOGICAL CHEMISTRY, 2016, 59 (03) :359-365

[7]

Crim SM, 2014, MMWR-MORBID MORTAL W, V63, P328

[8] Antibiotic resistance of Vibrio parahaemolyticus and Vibrio vulnificus in various countries: A review [J].

Elmahdi, Sara ;

DaSilva, Ligia V. ;

Parveen, Salina .

FOOD MICROBIOLOGY, 2016, 57 :128-134

[9] Antimicrobial susceptibilities of vibrio parahaemolyticus and vibrio vulnificus isolates from Louisiana gulf and retail raw oysters [J].

Han, Feifei ;

Walker, Robert D. ;

Janes, Marlene E. ;

Prinyawiwatkul, Witoon ;

Ge, Beilei .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (21) :7096-7098

[10] Identification of structural and morphogenesis genes of Pseudoalteromonas phage φRIO-1 and placement within the evolutionary history of Podoviridae [J].

Hardies, Stephen C. ;

Thomas, Julie A. ;

Black, Lindsay ;

Weintraub, Susan T. ;

Hwang, Chung Y. ;

Cho, Byung C. .

VIROLOGY, 2016, 489 :116-127

← 1 2 3 →