Detection of Campylobacter Species and Arcobacter butzleri in Stool Samples by Use of Real-Time Multiplex PCR

被引:43
|
作者
de Boer, Richard F. [1 ]
Ott, Alewijn [2 ]
Gueren, Pinar [1 ]
van Zanten, Evert [1 ]
van Belkum, Alex [3 ]
Kooistra-Smid, Anna M. D. [1 ,2 ]
机构
[1] Dept Res & Dev, Infect Dis Lab, Groningen, Netherlands
[2] Dept Med Microbiol, Infect Dis Lab, Groningen, Netherlands
[3] Erasmus MC, Univ Med Ctr, Dept Med Microbiol & Infect Dis, Rotterdam, Netherlands
关键词
INFECTIOUS INTESTINAL DISEASE; FECAL SAMPLES; UNITED-STATES; CONCISUS; PATHOGEN; GASTROENTERITIS; IDENTIFICATION; CRYAEROPHILUS; HUMANS; ASSAY;
D O I
10.1128/JCM.01716-12
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The presence of Campylobacter (or Campylobacter-like) species in stools from patients suspected of infectious gastroenteritis (n = 493) was investigated using real-time PCR for detection of Arcobacter butzleri (hsp60 gene), Campylobacter coli (ceuE gene), Campylobacter jejuni (mapA), five acknowledged pathogenic Campylobacter spp. (C16S_Lund assay), and the Campylobacter genus (C16S_LvI assay). In total, 71.4% of the samples were positive for Campylobacter DNA (n = 352) by a Campylobacter genus-specific (C16S_LvI) assay. A total of 23 samples (4.7%) were positive in the C16S_Lund assay, used for detection of C. jejuni, C. coli, C. lari, C. upsaliensis, and C. hyointestinalis. Subsequent identification of these samples yielded detection frequencies (DF) of 4.1% (C. jejuni), 0.4% (C. coli), and 0.4% (C. upsaliensis). The DF of A. butzleri was 0.4%. Interestingly, sequencing of a subgroup (n = 46) of C16S_LvI PCR-positive samples resulted in a considerable number of Campylobacter concisus-positive samples (n = 20). PCR-positive findings with the C16S_Lund and C. jejuni/C. coli-specific assays were associated with more serious clinical symptoms (diarrhea and blood). Threshold cycle (C-T) values of C. jejuni/C. coli PCR-positive samples were comparable to those of the C16S_Lund PCR (P = 0.21). C-T values for both assays were significantly lower than those of the C16S_LvI assay (P < 0.001 and P < 0.00001, respectively). In conclusion, this study demonstrated that in combination, the C. jejuni/C coli-specific assays and the C16S_Lund assay are both useful for routine screening purposes. Furthermore, the DF of the emerging pathogen C. concisus was at least similar to the DF of C. jejuni.
引用
收藏
页码:253 / 259
页数:7
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